The 2.0 version of rSNPBase

Variant report

Variant rs17280048
Chromosome Location chr7:105277366-105277367
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105239400-105289000 Weak transcription Right Atrium heart
2 chr7:105240400-105284400 Weak transcription HSMMtube muscle
3 chr7:105243200-105280200 Weak transcription Stomach Mucosa stomach
4 chr7:105243400-105289200 Weak transcription NHDF-Ad bronchial
5 chr7:105246200-105282600 Weak transcription Muscle Satellite Cultured Cells --
6 chr7:105247000-105308800 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr7:105248000-105278200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr7:105252200-105285400 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr7:105252200-105285600 Strong transcription Primary monocytes fromperipheralblood blood
10 chr7:105252400-105285200 Strong transcription Primary T helper cells PMA-I stimulated --
11 chr7:105252600-105290200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr7:105252800-105283800 Weak transcription NH-A brain
13 chr7:105252800-105285400 Strong transcription Fetal Thymus thymus
14 chr7:105254000-105284600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
15 chr7:105256400-105277400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr7:105262200-105279200 Weak transcription Fetal Heart heart
17 chr7:105262400-105277600 Weak transcription Osteobl bone
18 chr7:105262600-105277400 Weak transcription Brain Angular Gyrus brain
19 chr7:105264000-105282600 Weak transcription Colonic Mucosa Colon
20 chr7:105264600-105278000 Weak transcription NHLF lung
21 chr7:105264600-105279200 Weak transcription Brain Cingulate Gyrus brain
22 chr7:105265600-105277800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr7:105266400-105287600 Weak transcription A549 lung
24 chr7:105266800-105278000 Weak transcription Brain Substantia Nigra brain
25 chr7:105267000-105277400 Weak transcription Fetal Kidney kidney
26 chr7:105267000-105285400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr7:105267200-105278000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr7:105267200-105289000 Weak transcription Psoas Muscle Psoas
29 chr7:105267400-105285200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr7:105267600-105277600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr7:105267600-105278000 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr7:105268400-105293600 Strong transcription Primary B cells from peripheral blood blood
33 chr7:105268600-105277400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr7:105269200-105285600 Strong transcription Primary T cells from cord blood blood
35 chr7:105269400-105279400 Strong transcription Fetal Stomach stomach
36 chr7:105269400-105285200 Strong transcription Primary T cells fromperipheralblood blood
37 chr7:105269800-105289600 Weak transcription NHEK skin
38 chr7:105270000-105280200 Strong transcription Fetal Intestine Small intestine
39 chr7:105270400-105285600 Strong transcription Primary T helper cells fromperipheralblood blood
40 chr7:105270600-105285200 Strong transcription Liver Liver
41 chr7:105270800-105285200 Strong transcription Primary B cells from cord blood blood
42 chr7:105271200-105283600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr7:105271200-105285600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr7:105271200-105289000 Strong transcription Thymus Thymus
45 chr7:105271400-105281000 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr7:105271400-105283600 Strong transcription Duodenum Mucosa Duodenum
47 chr7:105271400-105285600 Strong transcription Primary T helper naive cells fromperipheralblood blood
48 chr7:105271600-105285400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr7:105271600-105289000 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr7:105271800-105279400 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015