Variant report

Variant	rs17294749
Chromosome Location	chr8:54426190-54426191
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752674	chr8:54181147-54483747	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:54409600-54426600	Weak transcription	Stomach Smooth Muscle	stomach
2	chr8:54411800-54433400	Weak transcription	Colon Smooth Muscle	Colon
3	chr8:54416800-54426600	Weak transcription	Right Ventricle	heart
4	chr8:54419200-54436200	Weak transcription	Pancreas	Pancrea
5	chr8:54421200-54427400	Enhancers	Fetal Heart	heart
6	chr8:54421800-54434800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:54422800-54434800	Weak transcription	Esophagus	oesophagus
8	chr8:54423200-54426600	Weak transcription	NHEK	skin
9	chr8:54423200-54426800	Weak transcription	HMEC	breast
10	chr8:54423400-54426800	Weak transcription	Aorta	Aorta
11	chr8:54423400-54426800	Weak transcription	Left Ventricle	heart
12	chr8:54424000-54427000	Weak transcription	Ovary	ovary
13	chr8:54424000-54428400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr8:54425000-54426400	Enhancers	Muscle Satellite Cultured Cells	--
15	chr8:54425000-54426600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr8:54425000-54426800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr8:54425200-54426400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr8:54425200-54427000	Weak transcription	Fetal Stomach	stomach
19	chr8:54425400-54426600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr8:54425800-54426600	Enhancers	Osteobl	bone
21	chr8:54426000-54426600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr8:54426000-54426600	Enhancers	NH-A	brain
23	chr8:54426000-54427000	Enhancers	HSMM	muscle

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