Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:175381430..175384329-chr4:175386718..175390657,4	K562	blood:
2	chr4:175380095..175381836-chr4:175431748..175433651,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10520284	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10520285	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17060524	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17060532	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17060537	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17060547	0.84[EUR][1000 genomes]
rs17060557	0.84[EUR][1000 genomes]
rs17294569	1.00[AFR][1000 genomes]
rs17294646	1.00[AFR][1000 genomes]
rs17359173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17359381	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17360116	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs45445797	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs45446798	0.84[EUR][1000 genomes]
rs45455595	1.00[AFR][1000 genomes]
rs45471401	0.84[EUR][1000 genomes]
rs45498507	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs45499501	1.00[AFR][1000 genomes]
rs45548931	1.00[AFR][1000 genomes]
rs45567139	1.00[AFR][1000 genomes]
rs45592532	1.00[AFR][1000 genomes]
rs45624235	1.00[AFR][1000 genomes]
rs4613543	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869116	chr4:175231090-175801761	Flanking Active TSS Enhancers Genic enhancers Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:175371800-175382600	Weak transcription	Small Intestine	intestine
2	chr4:175374600-175382800	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr4:175380800-175382000	Enhancers	Stomach Mucosa	stomach
4	chr4:175381200-175383600	Enhancers	Hela-S3	cervix
5	chr4:175381400-175382000	Enhancers	Gastric	stomach
6	chr4:175381400-175382800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr4:175381400-175383200	Enhancers	Colon Smooth Muscle	Colon
8	chr4:175381400-175383600	Enhancers	HepG2	liver
9	chr4:175381600-175382000	Flanking Active TSS	A549	lung
10	chr4:175381600-175383400	Enhancers	NH-A	brain
11	chr4:175381600-175383600	Enhancers	Fetal Intestine Large	intestine
12	chr4:175381600-175383600	Enhancers	Fetal Intestine Small	intestine
13	chr4:175381600-175383600	Enhancers	Rectal Mucosa Donor 31	rectum

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