Variant report

No.	Distal block	Cell Line	Cell type
1	chr1:172723346..172726622-chr1:172728222..172731165,3	MCF-7	breast:
2	chr1:172723025..172725126-chr1:172725246..172727256,2	MCF-7	breast:
3	chr1:172721667..172723809-chr1:172736769..172739376,2	K562	blood:
4	chr1:172721395..172723938-chr1:172727920..172730418,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11587368	0.80[EUR][1000 genomes]
rs11589360	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11810529	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12089435	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12141975	0.80[AMR][1000 genomes]
rs12760127	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12760147	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1476423	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1492905	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2022168	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2023623	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35319454	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs36060149	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56298311	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61810478	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs704846	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs859625	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs859626	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs859627	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs859630	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172716400-172729400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:172722200-172724400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr1:172722800-172723800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr1:172722800-172724200	Enhancers	Primary T helper cells PMA-I stimulated	--
5	chr1:172722800-172724400	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr1:172722800-172724800	Enhancers	Primary B cells from cord blood	blood
7	chr1:172723000-172724200	Enhancers	Primary hematopoietic stem cells	blood
8	chr1:172723000-172725000	Enhancers	Primary B cells from peripheral blood	blood
9	chr1:172723200-172723800	Enhancers	Primary T cells from cord blood	blood
10	chr1:172723200-172724200	Enhancers	Primary T helper naive cells from peripheral blood	blood
11	chr1:172723200-172724200	Enhancers	Primary T helper cells fromperipheralblood	blood
12	chr1:172723600-172724200	Bivalent Enhancer	GM12878-XiMat	blood

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