Variant report

Variant rs17431746
Chromosome Location chr11:70827440-70827441
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:70799800-70831000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr11:70800600-70850800 Weak transcription Right Atrium heart
3 chr11:70809400-70835200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr11:70813800-70830200 Strong transcription HepG2 liver
5 chr11:70818000-70831600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr11:70821000-70828400 Weak transcription Placenta Amnion Placenta Amnion
7 chr11:70821000-70831400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr11:70821000-70831600 Weak transcription Lung lung
9 chr11:70821000-70842000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr11:70821200-70835000 Weak transcription Fetal Kidney kidney
11 chr11:70822200-70831200 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr11:70824000-70861600 Weak transcription A549 lung
13 chr11:70824200-70831200 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr11:70824200-70831600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr11:70824400-70831800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:70824600-70827800 Weak transcription Fetal Intestine Large intestine
17 chr11:70824600-70831400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr11:70825400-70829800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr11:70825600-70831200 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr11:70826000-70831400 Weak transcription Brain Cingulate Gyrus brain
21 chr11:70826600-70827600 Strong transcription H9 Cell Line embryonic stem cell
22 chr11:70826600-70827800 Strong transcription Liver Liver
23 chr11:70826600-70827800 Strong transcription Pancreas Pancrea
24 chr11:70826600-70828000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr11:70826600-70828000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr11:70826600-70828000 Bivalent Enhancer Fetal Muscle Leg muscle
27 chr11:70827000-70827600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr11:70827000-70827800 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr11:70827000-70828000 Strong transcription Gastric stomach
30 chr11:70827000-70828200 Enhancers HSMM muscle
31 chr11:70827200-70827600 Genic enhancers Fetal Stomach stomach
32 chr11:70827200-70827800 Strong transcription H1 Cell Line embryonic stem cell
33 chr11:70827200-70827800 Enhancers Fetal Lung lung
34 chr11:70827200-70828000 Bivalent Enhancer Fetal Muscle Trunk muscle
35 chr11:70827200-70828200 Enhancers Duodenum Mucosa Duodenum
36 chr11:70827200-70828400 Weak transcription Muscle Satellite Cultured Cells --
37 chr11:70827200-70829800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr11:70827400-70827600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr11:70827400-70827600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:70827400-70829200 Genic enhancers Fetal Intestine Small intestine
41 chr11:70827400-70851200 Weak transcription Placenta Placenta

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