Variant report
| Variant | rs17458396 |
|---|---|
| Chromosome Location | chr12:40476759-40476760 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:40453800-40487400 | Weak transcription | Left Ventricle | heart |
| 2 | chr12:40464400-40493200 | Weak transcription | Colon Smooth Muscle | Colon |
| 3 | chr12:40466400-40498200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr12:40471400-40496800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 5 | chr12:40474400-40497000 | Weak transcription | Ovary | ovary |
| 6 | chr12:40474800-40480600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 7 | chr12:40475400-40483000 | Weak transcription | Adipose Nuclei | Adipose |
| 8 | chr12:40475400-40497200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 9 | chr12:40475600-40476800 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
| 10 | chr12:40475600-40476800 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 11 | chr12:40475600-40496400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 12 | chr12:40475800-40476800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 13 | chr12:40475800-40479400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 14 | chr12:40475800-40480000 | Weak transcription | Right Ventricle | heart |
| 15 | chr12:40476000-40479400 | Weak transcription | Liver | Liver |
| 16 | chr12:40476000-40480200 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 17 | chr12:40476200-40485400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 18 | chr12:40476400-40476800 | Enhancers | Placenta Amnion | Placenta Amnion |
| 19 | chr12:40476400-40478400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 20 | chr12:40476400-40486200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr12:40476400-40492400 | Weak transcription | K562 | blood |
| 22 | chr12:40476400-40497400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 23 | chr12:40476600-40476800 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 24 | chr12:40476600-40477000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 25 | chr12:40476600-40477000 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
| 26 | chr12:40476600-40477800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 27 | chr12:40476600-40480400 | Weak transcription | Aorta | Aorta |
| 28 | chr12:40476600-40484600 | Weak transcription | Fetal Intestine Large | intestine |
| 29 | chr12:40476600-40492600 | Weak transcription | Lung | lung |
| 30 | chr12:40476600-40498400 | Weak transcription | Fetal Stomach | stomach |
