Variant report

Variant rs17460992
Chromosome Location chr12:40453429-40453430
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:40449200-40457000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr12:40451200-40455000 Weak transcription Colon Smooth Muscle Colon
3 chr12:40452000-40458600 Enhancers Cortex derived primary cultured neurospheres brain
4 chr12:40452200-40453800 Enhancers Brain Germinal Matrix brain
5 chr12:40452800-40453600 Enhancers Brain Cingulate Gyrus brain
6 chr12:40452800-40453600 Enhancers Sigmoid Colon Sigmoid Colon
7 chr12:40452800-40453600 Enhancers Stomach Smooth Muscle stomach
8 chr12:40452800-40454000 Weak transcription Brain Substantia Nigra brain
9 chr12:40452800-40460000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr12:40453000-40455600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr12:40453000-40457000 Weak transcription Muscle Satellite Cultured Cells --
12 chr12:40453000-40457400 Weak transcription Brain Anterior Caudate brain
13 chr12:40453200-40456600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr12:40453200-40457200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:40453400-40453600 Enhancers Right Ventricle heart
16 chr12:40453400-40453800 Enhancers Left Ventricle heart
17 chr12:40453400-40454200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr12:40453400-40454800 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr12:40453400-40455200 Weak transcription Rectal Smooth Muscle rectum
20 chr12:40453400-40459600 Weak transcription Rectal Mucosa Donor 31 rectum

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