Variant report

Variant rs17573509
Chromosome Location chr17:44081224-44081225
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44051400-44081400 Weak transcription Right Atrium heart
2 chr17:44052000-44102600 Weak transcription Right Ventricle heart
3 chr17:44078800-44082000 Enhancers Brain Cingulate Gyrus brain
4 chr17:44079000-44082200 Enhancers Brain Hippocampus Middle brain
5 chr17:44079200-44082000 Enhancers Brain Anterior Caudate brain
6 chr17:44079200-44082000 Enhancers Brain Substantia Nigra brain
7 chr17:44079400-44082000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
8 chr17:44079600-44081800 Enhancers Fetal Muscle Leg muscle
9 chr17:44079600-44085600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr17:44079800-44082000 Enhancers Fetal Brain Male brain
11 chr17:44080000-44081400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr17:44080000-44081600 Enhancers Fetal Muscle Trunk muscle
13 chr17:44080000-44082000 Enhancers Rectal Mucosa Donor 31 rectum
14 chr17:44080200-44081400 Enhancers Duodenum Mucosa Duodenum
15 chr17:44080200-44081400 Enhancers Rectal Mucosa Donor 29 rectum
16 chr17:44080200-44081800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr17:44080200-44081800 Enhancers Pancreas Pancrea
18 chr17:44080200-44081800 Enhancers Stomach Smooth Muscle stomach
19 chr17:44080200-44082000 Enhancers Brain Angular Gyrus brain
20 chr17:44080200-44082000 Enhancers Skeletal Muscle Female skeletal muscle
21 chr17:44080200-44082000 Enhancers A549 lung
22 chr17:44080200-44082200 Enhancers Liver Liver
23 chr17:44080400-44081800 Enhancers Fetal Intestine Small intestine
24 chr17:44080400-44082200 Enhancers Fetal Heart heart
25 chr17:44080800-44081400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr17:44080800-44081800 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr17:44080800-44082000 Enhancers Brain Inferior Temporal Lobe brain
28 chr17:44081000-44081400 Enhancers Psoas Muscle Psoas
29 chr17:44081000-44081400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr17:44081000-44081600 Enhancers Brain Germinal Matrix brain
31 chr17:44081000-44081600 Enhancers Esophagus oesophagus
32 chr17:44081000-44081800 Enhancers Rectal Smooth Muscle rectum
33 chr17:44081000-44081800 Enhancers Stomach Mucosa stomach
34 chr17:44081000-44082000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr17:44081000-44082000 Enhancers Cortex derived primary cultured neurospheres brain
36 chr17:44081000-44082000 Enhancers Colon Smooth Muscle Colon
37 chr17:44081000-44082000 Enhancers Duodenum Smooth Muscle Duodenum
38 chr17:44081000-44082000 Enhancers Fetal Intestine Large intestine
39 chr17:44081000-44082000 Flanking Active TSS HepG2 liver
40 chr17:44081000-44082000 Enhancers HSMM muscle
41 chr17:44081000-44082200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr17:44081200-44081800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr17:44081200-44081800 Genic enhancers Fetal Brain Female brain
44 chr17:44081200-44081800 Enhancers Left Ventricle heart
45 chr17:44081200-44081800 Enhancers Osteobl bone
46 chr17:44081200-44082000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr17:44081200-44082000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr17:44081200-44082000 Enhancers Muscle Satellite Cultured Cells --
49 chr17:44081200-44082000 Enhancers Adipose Nuclei Adipose
50 chr17:44081200-44082000 Enhancers HSMMtube muscle

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