Variant report

Variant rs17573858
Chromosome Location chr17:44090796-44090797
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44052000-44102600 Weak transcription Right Ventricle heart
2 chr17:44081600-44091600 Weak transcription Esophagus oesophagus
3 chr17:44081800-44104800 Weak transcription Right Atrium heart
4 chr17:44082000-44090800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr17:44083400-44095600 Weak transcription Pancreas Pancrea
6 chr17:44085600-44104600 Weak transcription Fetal Brain Male brain
7 chr17:44086400-44091200 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr17:44086800-44091200 Strong transcription Brain Germinal Matrix brain
9 chr17:44086800-44091800 Strong transcription Fetal Brain Female brain
10 chr17:44087400-44090800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr17:44087600-44097600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr17:44087800-44091000 Weak transcription HSMM muscle
13 chr17:44087800-44091200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr17:44087800-44091400 Weak transcription Adipose Nuclei Adipose
15 chr17:44087800-44103800 Weak transcription NH-A brain
16 chr17:44088000-44090800 Weak transcription NHDF-Ad bronchial
17 chr17:44088000-44091000 Weak transcription Muscle Satellite Cultured Cells --
18 chr17:44088600-44099200 Weak transcription A549 lung
19 chr17:44089200-44092000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr17:44089800-44091800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
21 chr17:44089800-44092000 Genic enhancers Brain Substantia Nigra brain
22 chr17:44089800-44092200 Enhancers Fetal Muscle Trunk muscle
23 chr17:44090000-44091000 Weak transcription Placenta Amnion Placenta Amnion
24 chr17:44090200-44090800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
25 chr17:44090200-44091800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr17:44090200-44091800 Genic enhancers Brain Angular Gyrus brain
27 chr17:44090200-44092000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr17:44090200-44092000 Genic enhancers Brain Inferior Temporal Lobe brain
29 chr17:44090200-44092600 Enhancers Fetal Muscle Leg muscle
30 chr17:44090400-44091200 Enhancers Lung lung
31 chr17:44090400-44091800 Flanking Active TSS HepG2 liver
32 chr17:44090400-44092000 Enhancers Brain Cingulate Gyrus brain
33 chr17:44090600-44091200 Enhancers HUES64 Cell Line embryonic stem cell
34 chr17:44090600-44091400 Genic enhancers Cortex derived primary cultured neurospheres brain
35 chr17:44090600-44091400 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr17:44090600-44091600 Enhancers Brain Hippocampus Middle brain
37 chr17:44090600-44091800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr17:44090600-44092000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr17:44090600-44092000 Enhancers Brain Anterior Caudate brain
40 chr17:44090600-44092000 Enhancers Placenta Placenta
41 chr17:44090600-44092000 Genic enhancers Skeletal Muscle Male skeletal muscle
42 chr17:44090600-44092000 Enhancers HSMMtube muscle
43 chr17:44090600-44098400 Weak transcription Stomach Smooth Muscle stomach

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