Variant report

Variant	rs17591178
Chromosome Location	chr13:51578112-51578113
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:51562300..51564075-chr13:51577991..51579805,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs17650569	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7332491	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs73501618	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73501625	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7984936	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:51568000-51579800	Weak transcription	Pancreas	Pancrea
2	chr13:51575400-51578200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr13:51575400-51578400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr13:51575400-51579000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr13:51575400-51579000	Weak transcription	Right Atrium	heart
6	chr13:51575400-51579200	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr13:51575400-51580200	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr13:51575600-51578400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr13:51575600-51578400	Weak transcription	Esophagus	oesophagus
10	chr13:51575600-51578800	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr13:51575600-51579000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr13:51575600-51579200	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr13:51575600-51579200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr13:51575600-51579800	Weak transcription	Aorta	Aorta
15	chr13:51576000-51579400	Weak transcription	Fetal Thymus	thymus
16	chr13:51576600-51578400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr13:51576600-51578400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr13:51577000-51578200	Weak transcription	Fetal Intestine Large	intestine
19	chr13:51577000-51578800	Weak transcription	Fetal Intestine Small	intestine
20	chr13:51577800-51580200	Enhancers	Brain Germinal Matrix	brain
21	chr13:51577800-51581000	Enhancers	Fetal Muscle Leg	muscle
22	chr13:51578000-51578200	Enhancers	HSMMtube	muscle
23	chr13:51578000-51578400	Enhancers	Fetal Stomach	stomach
24	chr13:51578000-51579200	Enhancers	Primary monocytes fromperipheralblood	blood

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