Variant report

Variant rs17649641
Chromosome Location chr17:43997372-43997373
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:16 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43992200-44000000 Weak transcription HepG2 liver
2 chr17:43994400-43997400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr17:43994600-44000200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr17:43994800-44001400 Weak transcription Fetal Brain Female brain
5 chr17:43995000-44000600 Weak transcription Right Atrium heart
6 chr17:43995400-43997400 Enhancers Skeletal Muscle Female skeletal muscle
7 chr17:43996200-43997800 Weak transcription Liver Liver
8 chr17:43996600-44002800 Enhancers Brain Substantia Nigra brain
9 chr17:43996600-44003000 Enhancers Brain Angular Gyrus brain
10 chr17:43996800-43997400 Weak transcription Psoas Muscle Psoas
11 chr17:43996800-43998200 Strong transcription Brain Germinal Matrix brain
12 chr17:43996800-43999200 Enhancers Brain Anterior Caudate brain
13 chr17:43996800-44002600 Enhancers Brain Cingulate Gyrus brain
14 chr17:43997200-43997400 Weak transcription Brain Inferior Temporal Lobe brain
15 chr17:43997200-43997600 Enhancers Brain Hippocampus Middle brain
16 chr17:43997200-43997600 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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