Variant report

Variant rs17660398
Chromosome Location chr17:44170612-44170613
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44103800-44172800 Strong transcription Dnd41 blood
2 chr17:44128200-44184400 Weak transcription Colonic Mucosa Colon
3 chr17:44141000-44182600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr17:44144000-44171400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr17:44144200-44184400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr17:44144200-44206000 Weak transcription Esophagus oesophagus
7 chr17:44145000-44178400 Weak transcription Stomach Smooth Muscle stomach
8 chr17:44150600-44171400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr17:44150600-44171400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr17:44150600-44184400 Weak transcription H9 Cell Line embryonic stem cell
11 chr17:44151000-44178200 Weak transcription HMEC breast
12 chr17:44151200-44177000 Weak transcription NH-A brain
13 chr17:44151600-44178000 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr17:44152200-44183000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr17:44154800-44170800 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr17:44154800-44172200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr17:44156600-44178000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr17:44156800-44177400 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr17:44160000-44171200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr17:44160000-44175200 Weak transcription Fetal Heart heart
21 chr17:44160200-44176000 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr17:44160200-44181000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr17:44160400-44176200 Weak transcription Brain Cingulate Gyrus brain
24 chr17:44160400-44177400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr17:44161400-44177200 Weak transcription Stomach Mucosa stomach
26 chr17:44161400-44178800 Weak transcription Small Intestine intestine
27 chr17:44161600-44173200 Strong transcription Fetal Thymus thymus
28 chr17:44162000-44183000 Weak transcription Gastric stomach
29 chr17:44162000-44190200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr17:44162400-44172400 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr17:44163000-44184400 Weak transcription Spleen Spleen
32 chr17:44163200-44172800 Weak transcription Fetal Kidney kidney
33 chr17:44164400-44171200 Weak transcription Brain Germinal Matrix brain
34 chr17:44164400-44185400 Weak transcription Lung lung
35 chr17:44164400-44193200 Weak transcription Fetal Stomach stomach
36 chr17:44164600-44171200 Weak transcription Adipose Nuclei Adipose
37 chr17:44164600-44171400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr17:44164600-44171800 Weak transcription Brain Anterior Caudate brain
39 chr17:44164600-44172200 Strong transcription Primary B cells from peripheral blood blood
40 chr17:44164600-44185400 Weak transcription Pancreas Pancrea
41 chr17:44164800-44171400 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr17:44164800-44171600 Weak transcription Fetal Muscle Trunk muscle
43 chr17:44164800-44179600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr17:44164800-44183400 Weak transcription Right Ventricle heart
45 chr17:44165400-44172000 Strong transcription Hela-S3 cervix
46 chr17:44165400-44173600 Strong transcription GM12878-XiMat blood
47 chr17:44165600-44172200 Strong transcription HUES48 Cell Line embryonic stem cell
48 chr17:44165600-44172200 Genic enhancers Primary T helper cells PMA-I stimulated --
49 chr17:44165600-44172400 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr17:44165800-44172800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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