The 2.0 version of rSNPBase

Variant report

Variant rs17706149
Chromosome Location chr2:184022488-184022489
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:183990000-184024400 Weak transcription Placenta Amnion Placenta Amnion
2 chr2:183990000-184050000 Weak transcription Aorta Aorta
3 chr2:183990200-184036400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:183990600-184028600 Weak transcription Colonic Mucosa Colon
5 chr2:183990800-184025800 Weak transcription Fetal Kidney kidney
6 chr2:183990800-184031000 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:183991000-184028600 Weak transcription Right Ventricle heart
8 chr2:183991000-184030400 Weak transcription Brain Hippocampus Middle brain
9 chr2:183991000-184048400 Weak transcription Brain Angular Gyrus brain
10 chr2:183991000-184053400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr2:183991000-184055400 Weak transcription Brain Cingulate Gyrus brain
12 chr2:183991200-184035400 Weak transcription Fetal Brain Male brain
13 chr2:183991400-184034000 Weak transcription NHLF lung
14 chr2:183991400-184049600 Weak transcription NHDF-Ad bronchial
15 chr2:183991600-184029600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr2:183992400-184047600 Weak transcription Hela-S3 cervix
17 chr2:183995200-184026000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr2:183996000-184026400 Weak transcription Rectal Smooth Muscle rectum
19 chr2:183996400-184025800 Weak transcription Stomach Smooth Muscle stomach
20 chr2:184005000-184025200 Weak transcription Left Ventricle heart
21 chr2:184009000-184023000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:184009000-184023600 Weak transcription HMEC breast
23 chr2:184009000-184028600 Weak transcription H9 Cell Line embryonic stem cell
24 chr2:184009000-184043800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:184009200-184024200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr2:184009200-184024200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr2:184009200-184025000 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr2:184009200-184025200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:184009200-184025600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:184009200-184025800 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr2:184009200-184028400 Weak transcription Brain Anterior Caudate brain
32 chr2:184009200-184034000 Weak transcription Esophagus oesophagus
33 chr2:184009200-184043600 Weak transcription Psoas Muscle Psoas
34 chr2:184009200-184048400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr2:184009400-184024200 Weak transcription NH-A brain
36 chr2:184009400-184047200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr2:184013800-184025800 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr2:184014200-184031400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr2:184014400-184025200 Weak transcription Colon Smooth Muscle Colon
40 chr2:184014600-184024400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:184014600-184030800 Weak transcription Muscle Satellite Cultured Cells --
42 chr2:184015000-184022800 Weak transcription Right Atrium heart
43 chr2:184015000-184028800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr2:184015000-184029000 Weak transcription HSMMtube muscle
45 chr2:184015000-184062000 Weak transcription Small Intestine intestine
46 chr2:184015200-184028000 Weak transcription Fetal Heart heart
47 chr2:184015400-184027400 Weak transcription Osteobl bone
48 chr2:184016000-184030400 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr2:184016200-184030800 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr2:184016600-184028200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015