The 2.0 version of rSNPBase

Variant report

Variant rs17722870
Chromosome Location chr4:56344686-56344687
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56293000-56354800 Weak transcription Aorta Aorta
2 chr4:56302400-56375600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:56304600-56365600 Weak transcription Spleen Spleen
4 chr4:56304800-56375800 Weak transcription Pancreas Pancrea
5 chr4:56306000-56361200 Weak transcription Stomach Mucosa stomach
6 chr4:56314400-56356400 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr4:56314400-56377200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr4:56315400-56357000 Weak transcription Hela-S3 cervix
9 chr4:56318600-56363400 Weak transcription HepG2 liver
10 chr4:56318800-56352400 Weak transcription K562 blood
11 chr4:56318800-56358400 Weak transcription Right Ventricle heart
12 chr4:56328600-56350600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr4:56332600-56365600 Weak transcription Esophagus oesophagus
14 chr4:56332600-56377800 Weak transcription Gastric stomach
15 chr4:56336000-56376800 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr4:56337400-56377000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr4:56337600-56354600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr4:56340000-56345600 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr4:56340200-56345200 Strong transcription Primary B cells from peripheral blood blood
20 chr4:56341000-56354800 Weak transcription Fetal Stomach stomach
21 chr4:56341000-56363600 Weak transcription Placenta Amnion Placenta Amnion
22 chr4:56341200-56346400 Weak transcription Fetal Intestine Small intestine
23 chr4:56341200-56356400 Weak transcription Thymus Thymus
24 chr4:56341400-56347000 Weak transcription GM12878-XiMat blood
25 chr4:56341400-56364200 Weak transcription Rectal Smooth Muscle rectum
26 chr4:56341400-56365600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr4:56341400-56385600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr4:56341600-56352600 Weak transcription Primary B cells from cord blood blood
29 chr4:56341600-56354400 Weak transcription Brain Angular Gyrus brain
30 chr4:56341600-56354400 Weak transcription Colon Smooth Muscle Colon
31 chr4:56341600-56354400 Weak transcription Fetal Thymus thymus
32 chr4:56341600-56354800 Weak transcription Brain Anterior Caudate brain
33 chr4:56341600-56355600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr4:56341600-56357600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr4:56341600-56358200 Weak transcription Small Intestine intestine
36 chr4:56341600-56358600 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr4:56341600-56365800 Weak transcription Lung lung
38 chr4:56341600-56369200 Weak transcription HSMMtube muscle
39 chr4:56341600-56369400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr4:56341600-56377000 Weak transcription H9 Cell Line embryonic stem cell
41 chr4:56341800-56347400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr4:56341800-56348600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:56341800-56353400 Weak transcription Fetal Muscle Leg muscle
44 chr4:56341800-56354200 Weak transcription Fetal Kidney kidney
45 chr4:56341800-56354400 Weak transcription Colonic Mucosa Colon
46 chr4:56341800-56360400 Weak transcription Brain Inferior Temporal Lobe brain
47 chr4:56341800-56361000 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr4:56341800-56365600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr4:56341800-56366600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr4:56341800-56376400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015