Variant report

Variant rs177562
Chromosome Location chr11:16957667-16957668
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:16948200-16959600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr11:16948400-16967800 Weak transcription HepG2 liver
3 chr11:16948600-16967800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:16951200-16958000 Weak transcription Fetal Intestine Large intestine
5 chr11:16954600-16967400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr11:16954800-16964200 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr11:16955400-16958000 Enhancers Fetal Brain Male brain
8 chr11:16955400-16958200 Enhancers Fetal Heart heart
9 chr11:16955600-16958200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr11:16955600-16962400 Weak transcription H1 Cell Line embryonic stem cell
11 chr11:16955600-16991000 Weak transcription Right Atrium heart
12 chr11:16955800-16958200 Weak transcription Pancreas Pancrea
13 chr11:16955800-16958400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr11:16955800-16959600 Weak transcription Brain Substantia Nigra brain
15 chr11:16955800-16962400 Weak transcription Right Ventricle heart
16 chr11:16955800-16964800 Weak transcription Left Ventricle heart
17 chr11:16955800-16967600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr11:16955800-16967600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr11:16956000-16958000 Weak transcription Ovary ovary
20 chr11:16956000-16963400 Weak transcription Gastric stomach
21 chr11:16956200-16958200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr11:16957000-16958000 Weak transcription Fetal Intestine Small intestine
23 chr11:16957000-16959000 Enhancers Liver Liver
24 chr11:16957200-16958200 Enhancers Hela-S3 cervix
25 chr11:16957200-16958400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr11:16957200-16958600 Enhancers Duodenum Smooth Muscle Duodenum
27 chr11:16957200-16958800 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr11:16957400-16957800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr11:16957400-16957800 Enhancers A549 lung
30 chr11:16957400-16958000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr11:16957400-16958800 Enhancers Fetal Muscle Leg muscle
32 chr11:16957400-16959000 Enhancers Stomach Mucosa stomach
33 chr11:16957400-16961600 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr11:16957600-16958400 Weak transcription ES-WA7 Cell Line embryonic stem cell

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