Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10131318	1.00[ASN][1000 genomes]
rs10146438	1.00[CHB][hapmap]
rs10149290	1.00[CHB][hapmap]
rs12878874	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12881110	1.00[CHB][hapmap]
rs12896722	1.00[CHB][hapmap]
rs1367031	1.00[CHB][hapmap]
rs2021403	1.00[CHB][hapmap]
rs6571767	1.00[CHB][hapmap]
rs6571768	1.00[CHB][hapmap]
rs712390	1.00[CHB][hapmap]
rs712394	1.00[CHB][hapmap]
rs7143097	1.00[CHB][hapmap]
rs7147514	1.00[CHB][hapmap];0.90[GIH][hapmap];0.88[MEX][hapmap];1.00[ASN][1000 genomes]
rs7147556	1.00[CHB][hapmap];0.90[GIH][hapmap];0.88[MEX][hapmap];1.00[ASN][1000 genomes]
rs7159402	1.00[CHB][hapmap]
rs7159633	1.00[CHB][hapmap]
rs8017518	1.00[CHB][hapmap]
rs848697	1.00[CHB][hapmap]
rs848698	1.00[CHB][hapmap]
rs848699	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047290	chr14:36564568-37445157	Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
2	nsv534288	chr14:37254539-37697745	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17767143	SIP1	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:37372200-37374400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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