Variant report

Variant rs17798852
Chromosome Location chr2:55805172-55805173
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55752600-55831400 Weak transcription Stomach Mucosa stomach
2 chr2:55769600-55816000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr2:55770400-55818200 Weak transcription Small Intestine intestine
4 chr2:55770600-55821600 Strong transcription Primary monocytes fromperipheralblood blood
5 chr2:55770800-55815800 Strong transcription Liver Liver
6 chr2:55779600-55816200 Strong transcription Primary neutrophils fromperipheralblood blood
7 chr2:55779600-55831400 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr2:55781600-55808800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr2:55788600-55816600 Strong transcription Primary B cells from peripheral blood blood
10 chr2:55788800-55808200 Weak transcription Right Ventricle heart
11 chr2:55788800-55825200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr2:55789800-55808200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr2:55789800-55822800 Weak transcription HSMMtube muscle
14 chr2:55789800-55843600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:55790200-55812800 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr2:55790200-55829000 Weak transcription Brain Cingulate Gyrus brain
17 chr2:55790200-55842400 Weak transcription Fetal Brain Male brain
18 chr2:55790400-55808800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr2:55790400-55836200 Weak transcription Fetal Heart heart
20 chr2:55790800-55816600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:55790800-55819400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:55791200-55812200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr2:55791400-55805800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:55792000-55806000 Weak transcription Colon Smooth Muscle Colon
25 chr2:55793200-55805200 Weak transcription NHDF-Ad bronchial
26 chr2:55793400-55817000 Strong transcription Fetal Thymus thymus
27 chr2:55794200-55808000 Strong transcription Duodenum Mucosa Duodenum
28 chr2:55794200-55808800 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr2:55794200-55818200 Weak transcription Psoas Muscle Psoas
30 chr2:55794400-55812200 Weak transcription NHLF lung
31 chr2:55794400-55825200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr2:55794400-55829000 Weak transcription H1 Cell Line embryonic stem cell
33 chr2:55794800-55805800 Weak transcription Fetal Kidney kidney
34 chr2:55794800-55816200 Strong transcription Primary T cells fromperipheralblood blood
35 chr2:55795000-55807200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr2:55795200-55805200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:55795400-55807800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr2:55795600-55806800 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr2:55796000-55807200 Weak transcription HMEC breast
40 chr2:55796400-55805800 Weak transcription Placenta Amnion Placenta Amnion
41 chr2:55796800-55805800 Weak transcription Brain Hippocampus Middle brain
42 chr2:55796800-55823800 Weak transcription Thymus Thymus
43 chr2:55796800-55825200 Weak transcription Brain Substantia Nigra brain
44 chr2:55796800-55825600 Weak transcription Pancreas Pancrea
45 chr2:55796800-55829400 Weak transcription Esophagus oesophagus
46 chr2:55796800-55842600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr2:55797000-55811400 Weak transcription Brain Germinal Matrix brain
48 chr2:55797000-55818200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr2:55797000-55824200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr2:55797000-55828000 Weak transcription Aorta Aorta

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