Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10505290	1.00[AMR][1000 genomes]
rs11778640	0.93[CHB][hapmap]
rs11781136	0.93[CHB][hapmap];0.92[CHD][hapmap];0.82[YRI][hapmap]
rs11781519	0.93[CHB][hapmap];0.83[CHD][hapmap]
rs11990337	0.81[CHB][hapmap]
rs12547184	0.91[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs12549895	0.93[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs13251837	0.86[CHB][hapmap]
rs13253360	0.93[CHB][hapmap];0.92[CHD][hapmap]
rs13258165	0.93[CHB][hapmap]
rs13266865	0.93[CHB][hapmap]
rs17744843	0.93[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.96[ASN][1000 genomes]
rs17744897	0.93[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs17744945	0.93[CHB][hapmap];0.83[CHD][hapmap];0.82[YRI][hapmap]
rs17744969	0.93[CHB][hapmap]
rs17745004	0.85[CHB][hapmap]
rs17745016	0.93[CHB][hapmap];0.83[CHD][hapmap]
rs17812479	0.82[JPT][hapmap];0.93[ASN][1000 genomes]
rs17812503	0.93[CHB][hapmap];1.00[CHD][hapmap];0.85[JPT][hapmap];0.82[YRI][hapmap];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2938860	0.86[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4339677	1.00[AMR][1000 genomes]
rs963926	0.93[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530386	chr8:117509968-118391406	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
2	nsv1027920	chr8:117983619-118079816	Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv539732	chr8:117983619-118079816	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv6360	chr8:118005370-118030914	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv17971	chr8:118005483-118008163	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1800268	chr8:118007295-118021671	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118006800-118008000	Enhancers	Fetal Heart	heart

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