Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:57920819..57922347-chr7:147503999..147506112,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10488352	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs1074211	1.00[CEU][hapmap]
rs12530803	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs12530825	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs12531773	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12532478	1.00[CEU][hapmap]
rs12533240	1.00[CEU][hapmap]
rs12535052	1.00[CEU][hapmap]
rs12539579	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs17170742	0.82[CEU][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes]
rs17227005	1.00[CEU][hapmap]
rs17234222	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17234350	1.00[CEU][hapmap]
rs17234406	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs17825333	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17825749	1.00[CEU][hapmap]
rs17825832	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs17825924	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs17827453	0.82[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2058506	0.82[CEU][hapmap];1.00[TSI][hapmap]
rs700321	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
2	nsv889397	chr7:147471710-147585819	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147494600-147506200	Weak transcription	Brain Substantia Nigra	brain
2	chr7:147501000-147506200	Weak transcription	Ovary	ovary
3	chr7:147501600-147506400	Weak transcription	Fetal Lung	lung

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