Variant report
| Variant | rs17861376 |
|---|---|
| Chromosome Location | chr7:126592076-126592077 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:25)
| rs_ID | r2[population] |
|---|---|
| rs1003036 | 0.96[CEU][hapmap] |
| rs1121874 | 1.00[CEU][hapmap] |
| rs1154324 | 1.00[CEU][hapmap] |
| rs1154325 | 1.00[CEU][hapmap] |
| rs1155597 | 1.00[CEU][hapmap] |
| rs1204563 | 0.96[CEU][hapmap] |
| rs1204567 | 0.96[CEU][hapmap] |
| rs1204569 | 0.96[CEU][hapmap] |
| rs1204579 | 0.96[CEU][hapmap] |
| rs1204583 | 0.96[CEU][hapmap] |
| rs1204588 | 1.00[CEU][hapmap] |
| rs1204593 | 1.00[CEU][hapmap] |
| rs1204594 | 1.00[CEU][hapmap] |
| rs1211384 | 1.00[CEU][hapmap] |
| rs1419465 | 0.96[CEU][hapmap] |
| rs1548766 | 0.96[CEU][hapmap] |
| rs2067052 | 0.96[CEU][hapmap] |
| rs2072416 | 0.96[CEU][hapmap] |
| rs2518949 | 0.96[CEU][hapmap] |
| rs2518954 | 0.95[CEU][hapmap] |
| rs2518955 | 0.96[CEU][hapmap] |
| rs2535926 | 0.96[CEU][hapmap] |
| rs2535932 | 0.96[CEU][hapmap] |
| rs2535938 | 0.96[CEU][hapmap] |
| rs6975379 | 1.00[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv2758132 | chr7:126494789-126677843 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
| 2 | esv2759562 | chr7:126494789-126677843 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
| 3 | nsv427805 | chr7:126494789-126677843 | Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
| 4 | nsv608378 | chr7:126570120-126597132 | Enhancers Weak transcription | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
