Variant report
| Variant | rs17863199 |
|---|---|
| Chromosome Location | chr7:126695735-126695736 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:59)
| rs_ID | r2[population] |
|---|---|
| rs10268335 | 1.00[CEU][hapmap] |
| rs10271115 | 1.00[CEU][hapmap] |
| rs10487464 | 1.00[CEU][hapmap] |
| rs10487465 | 1.00[CEU][hapmap] |
| rs10487466 | 1.00[CEU][hapmap] |
| rs11563503 | 1.00[CEU][hapmap] |
| rs11563505 | 1.00[CEU][hapmap] |
| rs11563749 | 1.00[CEU][hapmap] |
| rs11563750 | 1.00[CEU][hapmap] |
| rs11563755 | 1.00[CEU][hapmap] |
| rs11563756 | 1.00[CEU][hapmap] |
| rs11563757 | 1.00[CEU][hapmap] |
| rs11563758 | 1.00[CEU][hapmap] |
| rs11563759 | 1.00[CEU][hapmap] |
| rs11563760 | 1.00[CEU][hapmap] |
| rs11563761 | 1.00[CEU][hapmap] |
| rs11563762 | 1.00[CEU][hapmap] |
| rs11563764 | 1.00[CEU][hapmap] |
| rs11563765 | 1.00[CEU][hapmap] |
| rs11563766 | 1.00[CEU][hapmap] |
| rs11563767 | 1.00[CEU][hapmap] |
| rs11563768 | 1.00[CEU][hapmap] |
| rs11563769 | 1.00[CEU][hapmap] |
| rs11563771 | 1.00[CEU][hapmap] |
| rs11563772 | 1.00[CEU][hapmap] |
| rs11563773 | 1.00[CEU][hapmap] |
| rs11563774 | 1.00[CEU][hapmap] |
| rs11563787 | 1.00[CEU][hapmap] |
| rs11563788 | 1.00[CEU][hapmap] |
| rs12667596 | 1.00[CEU][hapmap] |
| rs12670200 | 1.00[CEU][hapmap] |
| rs12670241 | 1.00[CEU][hapmap] |
| rs12670940 | 1.00[CEU][hapmap] |
| rs1419440 | 1.00[CEU][hapmap] |
| rs1419441 | 1.00[CEU][hapmap] |
| rs17862270 | 0.85[CEU][hapmap] |
| rs17862273 | 1.00[CEU][hapmap] |
| rs17862275 | 1.00[CEU][hapmap] |
| rs17862277 | 1.00[CEU][hapmap] |
| rs17863187 | 1.00[CEU][hapmap] |
| rs17863198 | 1.00[CEU][hapmap] |
| rs17864094 | 1.00[CEU][hapmap] |
| rs17866413 | 1.00[CEU][hapmap] |
| rs17867742 | 1.00[CEU][hapmap] |
| rs17867745 | 1.00[CEU][hapmap] |
| rs17868694 | 1.00[CEU][hapmap] |
| rs2237781 | 1.00[CEU][hapmap] |
| rs2402849 | 1.00[CEU][hapmap] |
| rs3779538 | 1.00[CEU][hapmap] |
| rs3779539 | 1.00[CEU][hapmap] |
| rs3808129 | 1.00[CEU][hapmap] |
| rs3808130 | 1.00[CEU][hapmap] |
| rs6467106 | 1.00[CEU][hapmap] |
| rs6467107 | 1.00[CEU][hapmap] |
| rs6467108 | 1.00[CEU][hapmap] |
| rs6467109 | 1.00[CEU][hapmap] |
| rs6958658 | 1.00[CEU][hapmap] |
| rs6962580 | 1.00[CEU][hapmap] |
| rs7795745 | 1.00[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv831121 | chr7:126593363-126774413 | Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 6 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:126695400-126696600 | Enhancers | Fetal Intestine Large | intestine |
