Variant report
| Variant | rs17867037 |
|---|---|
| Chromosome Location | chr7:127038851-127038852 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:127030420..127033990-chr7:127034934..127040808,8 | MCF-7 | breast: | |
| 2 | chr7:127031453..127035052-chr7:127037163..127040431,4 | MCF-7 | breast: | |
| 3 | chr7:127038677..127040829-chr7:127049998..127052890,2 | MCF-7 | breast: | |
| 4 | chr7:126987437..126990960-chr7:127034932..127038867,5 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000048405 | Chromatin interaction |
| ENSG00000224138 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:20)
| rs_ID | r2[population] |
|---|---|
| rs10230771 | 1.00[JPT][hapmap] |
| rs10243337 | 1.00[JPT][hapmap] |
| rs10243876 | 1.00[JPT][hapmap] |
| rs10808228 | 1.00[JPT][hapmap] |
| rs10954150 | 1.00[JPT][hapmap] |
| rs12706789 | 1.00[JPT][hapmap] |
| rs12706790 | 1.00[JPT][hapmap] |
| rs17864185 | 1.00[JPT][hapmap] |
| rs17864189 | 1.00[JPT][hapmap] |
| rs17865997 | 1.00[JPT][hapmap] |
| rs17867065 | 1.00[JPT][hapmap] |
| rs17867809 | 1.00[JPT][hapmap] |
| rs17869261 | 1.00[JPT][hapmap] |
| rs17869284 | 1.00[JPT][hapmap] |
| rs17869613 | 1.00[EUR][1000 genomes] |
| rs1833067 | 1.00[JPT][hapmap] |
| rs4731360 | 1.00[JPT][hapmap] |
| rs7808943 | 1.00[JPT][hapmap] |
| rs7809156 | 1.00[JPT][hapmap] |
| rs7809187 | 1.00[JPT][hapmap] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
