Variant report

Variant rs17879500
Chromosome Location chr13:96422236-96422237
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96367600-96436000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr13:96367800-96430200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr13:96387000-96428800 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr13:96394000-96435800 Weak transcription A549 lung
5 chr13:96394400-96438400 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr13:96394600-96435800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr13:96398200-96424400 Weak transcription NHDF-Ad bronchial
8 chr13:96398400-96436200 Weak transcription Colon Smooth Muscle Colon
9 chr13:96398400-96439400 Weak transcription Brain Hippocampus Middle brain
10 chr13:96404000-96433200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr13:96404000-96439400 Weak transcription Thymus Thymus
12 chr13:96405400-96436800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr13:96405400-96439400 Weak transcription Brain Cingulate Gyrus brain
14 chr13:96405400-96452600 Weak transcription Psoas Muscle Psoas
15 chr13:96405600-96455800 Weak transcription Fetal Heart heart
16 chr13:96406600-96435800 Weak transcription Gastric stomach
17 chr13:96406600-96436000 Weak transcription NHLF lung
18 chr13:96406800-96435800 Weak transcription Pancreas Pancrea
19 chr13:96407000-96433400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr13:96407200-96439400 Weak transcription Brain Anterior Caudate brain
21 chr13:96408400-96443600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr13:96408600-96430200 Weak transcription Hela-S3 cervix
23 chr13:96408600-96443200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr13:96408600-96445400 Weak transcription K562 blood
25 chr13:96408800-96425200 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr13:96409600-96424200 Strong transcription Liver Liver
27 chr13:96409600-96424400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr13:96409800-96434200 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr13:96410400-96436200 Weak transcription Aorta Aorta
30 chr13:96411400-96424200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr13:96411400-96439400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr13:96412000-96443400 Weak transcription Colonic Mucosa Colon
33 chr13:96412200-96423400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr13:96412200-96424000 Strong transcription Primary T cells from cord blood blood
35 chr13:96413200-96424400 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr13:96413200-96439800 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr13:96414000-96432400 Weak transcription Ovary ovary
38 chr13:96414000-96435800 Weak transcription Right Ventricle heart
39 chr13:96414000-96436600 Weak transcription Rectal Smooth Muscle rectum
40 chr13:96414000-96443400 Weak transcription Brain Angular Gyrus brain
41 chr13:96414400-96443400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr13:96414600-96433400 Weak transcription Spleen Spleen
43 chr13:96415600-96439400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr13:96416200-96423600 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr13:96416200-96429200 Weak transcription Fetal Muscle Leg muscle
46 chr13:96416200-96433200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr13:96416200-96433600 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr13:96416200-96436400 Weak transcription HSMMtube muscle
49 chr13:96416200-96439200 Weak transcription Brain Substantia Nigra brain
50 chr13:96416200-96439200 Weak transcription Fetal Muscle Trunk muscle

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