The 2.0 version of rSNPBase

Variant report

Variant rs1788143
Chromosome Location chr8:100689649-100689650
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100656000-100694400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr8:100672000-100697400 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr8:100674600-100694000 Weak transcription HSMM muscle
4 chr8:100675400-100706000 Weak transcription Left Ventricle heart
5 chr8:100682400-100694800 Weak transcription Pancreas Pancrea
6 chr8:100686400-100692000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr8:100687000-100690600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr8:100687000-100739800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr8:100687800-100694800 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr8:100687800-100696400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr8:100688200-100690800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr8:100688400-100708200 Weak transcription HSMMtube muscle
13 chr8:100688600-100690400 Strong transcription Primary B cells from cord blood blood
14 chr8:100688600-100694800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr8:100688600-100696600 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr8:100688600-100697000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr8:100688600-100705600 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr8:100688800-100691200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr8:100688800-100691600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr8:100688800-100693600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr8:100688800-100694400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr8:100688800-100695000 Weak transcription Esophagus oesophagus
23 chr8:100688800-100696600 Weak transcription Primary hematopoietic stem cells blood
24 chr8:100688800-100696600 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr8:100688800-100697400 Weak transcription Duodenum Mucosa Duodenum
26 chr8:100688800-100697600 Weak transcription Primary T cells from cord blood blood
27 chr8:100688800-100698200 Weak transcription Fetal Stomach stomach
28 chr8:100688800-100698200 Weak transcription Ovary ovary
29 chr8:100688800-100698400 Weak transcription Aorta Aorta
30 chr8:100688800-100698800 Weak transcription Gastric stomach
31 chr8:100688800-100704600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr8:100688800-100711400 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr8:100688800-100716000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr8:100689000-100693400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr8:100689000-100696000 Weak transcription Fetal Lung lung
36 chr8:100689000-100696000 Weak transcription Dnd41 blood
37 chr8:100689000-100698800 Weak transcription Thymus Thymus
38 chr8:100689200-100691600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015