Variant report
| Variant | rs17882407 |
|---|---|
| Chromosome Location | chr13:96439635-96439636 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:96405400-96452600 | Weak transcription | Psoas Muscle | Psoas |
| 2 | chr13:96405600-96455800 | Weak transcription | Fetal Heart | heart |
| 3 | chr13:96408400-96443600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 4 | chr13:96408600-96443200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr13:96408600-96445400 | Weak transcription | K562 | blood |
| 6 | chr13:96412000-96443400 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr13:96413200-96439800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 8 | chr13:96414000-96443400 | Weak transcription | Brain Angular Gyrus | brain |
| 9 | chr13:96414400-96443400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 10 | chr13:96416200-96443400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 11 | chr13:96416200-96445400 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr13:96416400-96440000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 13 | chr13:96416400-96440200 | Weak transcription | HepG2 | liver |
| 14 | chr13:96422200-96440600 | Weak transcription | Fetal Lung | lung |
| 15 | chr13:96429600-96444200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 16 | chr13:96430000-96457400 | Weak transcription | Brain Germinal Matrix | brain |
| 17 | chr13:96431600-96442400 | Weak transcription | Fetal Brain Female | brain |
| 18 | chr13:96432400-96443000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 19 | chr13:96433000-96453000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 20 | chr13:96434200-96441600 | Weak transcription | Fetal Intestine Small | intestine |
| 21 | chr13:96434400-96443400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 22 | chr13:96435000-96445800 | Strong transcription | Primary B cells from cord blood | blood |
| 23 | chr13:96435000-96447800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 24 | chr13:96435600-96447200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 25 | chr13:96435800-96446800 | Strong transcription | Primary T cells from cord blood | blood |
| 26 | chr13:96436000-96440800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 27 | chr13:96436000-96449000 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 28 | chr13:96436200-96446600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 29 | chr13:96436200-96447000 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 30 | chr13:96436200-96452200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 31 | chr13:96436400-96443600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 32 | chr13:96436400-96444600 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 33 | chr13:96436800-96440000 | Weak transcription | Right Ventricle | heart |
| 34 | chr13:96437000-96442800 | Weak transcription | Colon Smooth Muscle | Colon |
| 35 | chr13:96437000-96443200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 36 | chr13:96437000-96443400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 37 | chr13:96437000-96451400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 38 | chr13:96437200-96440800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr13:96437200-96441600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 40 | chr13:96437200-96442600 | Weak transcription | Fetal Stomach | stomach |
| 41 | chr13:96437200-96443200 | Weak transcription | Gastric | stomach |
| 42 | chr13:96437200-96443400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 43 | chr13:96437200-96443400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 44 | chr13:96437200-96444600 | Weak transcription | A549 | lung |
| 45 | chr13:96437200-96445000 | Weak transcription | Aorta | Aorta |
| 46 | chr13:96437200-96445200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 47 | chr13:96437400-96443200 | Weak transcription | Hela-S3 | cervix |
| 48 | chr13:96437400-96445800 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 49 | chr13:96437400-96448800 | Strong transcription | Liver | Liver |
| 50 | chr13:96437600-96439800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
