The 2.0 version of rSNPBase

Variant report

Variant rs17882543
Chromosome Location chr13:96436957-96436958
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96394400-96438400 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr13:96398400-96439400 Weak transcription Brain Hippocampus Middle brain
3 chr13:96404000-96439400 Weak transcription Thymus Thymus
4 chr13:96405400-96439400 Weak transcription Brain Cingulate Gyrus brain
5 chr13:96405400-96452600 Weak transcription Psoas Muscle Psoas
6 chr13:96405600-96455800 Weak transcription Fetal Heart heart
7 chr13:96407200-96439400 Weak transcription Brain Anterior Caudate brain
8 chr13:96408400-96443600 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr13:96408600-96443200 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr13:96408600-96445400 Weak transcription K562 blood
11 chr13:96411400-96439400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr13:96412000-96443400 Weak transcription Colonic Mucosa Colon
13 chr13:96413200-96439800 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr13:96414000-96443400 Weak transcription Brain Angular Gyrus brain
15 chr13:96414400-96443400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr13:96415600-96439400 Weak transcription Brain Inferior Temporal Lobe brain
17 chr13:96416200-96439200 Weak transcription Brain Substantia Nigra brain
18 chr13:96416200-96439200 Weak transcription Fetal Muscle Trunk muscle
19 chr13:96416200-96443400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr13:96416200-96445400 Weak transcription Fetal Kidney kidney
21 chr13:96416400-96440000 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr13:96416400-96440200 Weak transcription HepG2 liver
23 chr13:96417600-96438400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr13:96417600-96439400 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr13:96417600-96439400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr13:96422200-96440600 Weak transcription Fetal Lung lung
27 chr13:96422400-96439400 Weak transcription Small Intestine intestine
28 chr13:96423800-96439600 Weak transcription Esophagus oesophagus
29 chr13:96429400-96438000 Weak transcription Primary B cells from peripheral blood blood
30 chr13:96429600-96444200 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr13:96430000-96457400 Weak transcription Brain Germinal Matrix brain
32 chr13:96431000-96438400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr13:96431000-96439400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr13:96431600-96442400 Weak transcription Fetal Brain Female brain
35 chr13:96432400-96443000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr13:96433000-96453000 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr13:96433600-96437800 Weak transcription Fetal Muscle Leg muscle
38 chr13:96433600-96439200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr13:96433800-96438400 Weak transcription Primary hematopoietic stem cells blood
40 chr13:96433800-96438600 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr13:96433800-96439000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr13:96433800-96439000 Weak transcription Fetal Intestine Large intestine
43 chr13:96433800-96439400 Weak transcription Lung lung
44 chr13:96433800-96439400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr13:96433800-96439400 Weak transcription Spleen Spleen
46 chr13:96434000-96437000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr13:96434000-96438000 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr13:96434000-96438400 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr13:96434000-96438600 Weak transcription Adipose Nuclei Adipose
50 chr13:96434000-96439200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015