Variant report
| Variant | rs17882939 |
|---|---|
| Chromosome Location | chr13:96415036-96415037 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:96366400-96415800 | Weak transcription | HSMMtube | muscle |
| 2 | chr13:96367600-96436000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 3 | chr13:96367800-96430200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 4 | chr13:96386800-96415200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 5 | chr13:96386800-96415600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 6 | chr13:96387000-96415400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 7 | chr13:96387000-96428800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 8 | chr13:96393800-96415800 | Weak transcription | Osteobl | bone |
| 9 | chr13:96394000-96415200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 10 | chr13:96394000-96435800 | Weak transcription | A549 | lung |
| 11 | chr13:96394400-96438400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 12 | chr13:96394600-96435800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 13 | chr13:96394800-96420600 | Weak transcription | Esophagus | oesophagus |
| 14 | chr13:96398200-96424400 | Weak transcription | NHDF-Ad | bronchial |
| 15 | chr13:96398400-96415600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 16 | chr13:96398400-96436200 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr13:96398400-96439400 | Weak transcription | Brain Hippocampus Middle | brain |
| 18 | chr13:96400000-96415400 | Weak transcription | HepG2 | liver |
| 19 | chr13:96403200-96421800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 20 | chr13:96404000-96433200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 21 | chr13:96404000-96439400 | Weak transcription | Thymus | Thymus |
| 22 | chr13:96405400-96436800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 23 | chr13:96405400-96439400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr13:96405400-96452600 | Weak transcription | Psoas Muscle | Psoas |
| 25 | chr13:96405600-96455800 | Weak transcription | Fetal Heart | heart |
| 26 | chr13:96406600-96415800 | Weak transcription | NHEK | skin |
| 27 | chr13:96406600-96435800 | Weak transcription | Gastric | stomach |
| 28 | chr13:96406600-96436000 | Weak transcription | NHLF | lung |
| 29 | chr13:96406800-96435800 | Weak transcription | Pancreas | Pancrea |
| 30 | chr13:96407000-96433400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 31 | chr13:96407200-96439400 | Weak transcription | Brain Anterior Caudate | brain |
| 32 | chr13:96408400-96443600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr13:96408600-96415800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 34 | chr13:96408600-96415800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr13:96408600-96417200 | Weak transcription | Small Intestine | intestine |
| 36 | chr13:96408600-96430200 | Weak transcription | Hela-S3 | cervix |
| 37 | chr13:96408600-96443200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 38 | chr13:96408600-96445400 | Weak transcription | K562 | blood |
| 39 | chr13:96408800-96417800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 40 | chr13:96408800-96425200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 41 | chr13:96409000-96415400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 42 | chr13:96409000-96418200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 43 | chr13:96409600-96418200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 44 | chr13:96409600-96421000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 45 | chr13:96409600-96424200 | Strong transcription | Liver | Liver |
| 46 | chr13:96409600-96424400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 47 | chr13:96409800-96434200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 48 | chr13:96410200-96415600 | Weak transcription | HMEC | breast |
| 49 | chr13:96410400-96436200 | Weak transcription | Aorta | Aorta |
| 50 | chr13:96411000-96421000 | Weak transcription | Fetal Intestine Small | intestine |
