Variant report
| Variant | rs17885366 |
|---|---|
| Chromosome Location | chr13:96362391-96362392 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:96337600-96364200 | Weak transcription | Ovary | ovary |
| 2 | chr13:96347000-96377600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr13:96349800-96363000 | Weak transcription | Fetal Lung | lung |
| 4 | chr13:96350800-96363800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 5 | chr13:96350800-96365400 | Weak transcription | HSMMtube | muscle |
| 6 | chr13:96351000-96362400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 7 | chr13:96351000-96362600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr13:96351000-96362600 | Weak transcription | Adipose Nuclei | Adipose |
| 9 | chr13:96351000-96363600 | Weak transcription | Colonic Mucosa | Colon |
| 10 | chr13:96351000-96365800 | Weak transcription | Brain Anterior Caudate | brain |
| 11 | chr13:96351000-96365800 | Weak transcription | Fetal Brain Male | brain |
| 12 | chr13:96351000-96368600 | Weak transcription | Lung | lung |
| 13 | chr13:96354200-96364600 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr13:96355000-96364800 | Weak transcription | Esophagus | oesophagus |
| 15 | chr13:96355600-96364000 | Weak transcription | HepG2 | liver |
| 16 | chr13:96355800-96362400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 17 | chr13:96355800-96364000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 18 | chr13:96356000-96365200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 19 | chr13:96356000-96372400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr13:96356200-96363200 | Weak transcription | HMEC | breast |
| 21 | chr13:96356400-96363800 | Weak transcription | Fetal Kidney | kidney |
| 22 | chr13:96356600-96363000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 23 | chr13:96356600-96393600 | Weak transcription | Right Ventricle | heart |
| 24 | chr13:96356800-96366000 | Weak transcription | Hela-S3 | cervix |
| 25 | chr13:96358600-96363400 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 26 | chr13:96358800-96362600 | Weak transcription | Fetal Stomach | stomach |
| 27 | chr13:96358800-96365600 | Weak transcription | Brain Hippocampus Middle | brain |
| 28 | chr13:96359000-96364200 | Weak transcription | Psoas Muscle | Psoas |
| 29 | chr13:96359400-96363200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 30 | chr13:96359400-96386200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 31 | chr13:96359800-96368000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 32 | chr13:96359800-96379200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 33 | chr13:96360000-96362400 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 34 | chr13:96360000-96363200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr13:96360000-96364600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 36 | chr13:96360000-96364800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 37 | chr13:96360200-96362800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 38 | chr13:96360200-96363800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 39 | chr13:96360200-96364200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 40 | chr13:96360200-96365600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 41 | chr13:96360400-96362400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr13:96360400-96365400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 43 | chr13:96360400-96369400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 44 | chr13:96360600-96364600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 45 | chr13:96360600-96364600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr13:96360600-96367200 | Weak transcription | Gastric | stomach |
| 47 | chr13:96360600-96379200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 48 | chr13:96360600-96383000 | Weak transcription | K562 | blood |
| 49 | chr13:96360600-96384000 | Weak transcription | Small Intestine | intestine |
| 50 | chr13:96360800-96363000 | Weak transcription | Brain Substantia Nigra | brain |
