Variant report

Variant rs1799923
Chromosome Location chr3:42306294-42306295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:42303800-42307600 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr3:42304800-42306400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
3 chr3:42304800-42306400 Bivalent Enhancer Primary B cells from cord blood blood
4 chr3:42304800-42306400 Bivalent Enhancer Liver Liver
5 chr3:42304800-42306600 Bivalent Enhancer Primary B cells from peripheral blood blood
6 chr3:42304800-42306600 Bivalent Enhancer Fetal Heart heart
7 chr3:42304800-42306800 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
8 chr3:42304800-42307000 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
9 chr3:42304800-42307000 Bivalent/Poised TSS Brain Anterior Caudate brain
10 chr3:42304800-42307400 Bivalent Enhancer Fetal Brain Male brain
11 chr3:42304800-42307400 Bivalent Enhancer Fetal Thymus thymus
12 chr3:42304800-42307600 Bivalent Enhancer Placenta Placenta
13 chr3:42305000-42306600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
14 chr3:42305000-42307400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:42305200-42306600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:42305200-42306800 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
17 chr3:42305400-42306400 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
18 chr3:42305400-42306600 Bivalent Enhancer Primary hematopoietic stem cells blood
19 chr3:42305400-42306800 Bivalent/Poised TSS Rectal Smooth Muscle rectum
20 chr3:42305400-42307000 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
21 chr3:42305400-42307400 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
22 chr3:42305400-42311200 Weak transcription Right Atrium heart
23 chr3:42305600-42306400 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
24 chr3:42305600-42306400 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
25 chr3:42305600-42306600 Flanking Bivalent TSS/Enh Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr3:42305600-42307000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:42305600-42307200 Bivalent Enhancer Stomach Mucosa stomach
28 chr3:42305800-42306400 Bivalent Enhancer H1 Cell Line embryonic stem cell
29 chr3:42305800-42306400 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
30 chr3:42305800-42306400 Flanking Bivalent TSS/Enh Brain Cingulate Gyrus brain
31 chr3:42305800-42306600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:42305800-42306600 Bivalent Enhancer Esophagus oesophagus
33 chr3:42305800-42306600 Bivalent Enhancer Left Ventricle heart
34 chr3:42305800-42306600 Flanking Bivalent TSS/Enh NHEK skin
35 chr3:42305800-42307200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
36 chr3:42306000-42306400 Flanking Bivalent TSS/Enh Brain Inferior Temporal Lobe brain
37 chr3:42306000-42306400 Flanking Bivalent TSS/Enh Fetal Brain Female brain
38 chr3:42306000-42306400 Bivalent Enhancer Fetal Lung lung
39 chr3:42306000-42306400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
40 chr3:42306000-42306400 Bivalent Enhancer HMEC breast
41 chr3:42306000-42306400 Bivalent/Poised TSS NHLF lung
42 chr3:42306000-42306600 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr3:42306000-42306600 Flanking Bivalent TSS/Enh Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:42306000-42306600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
45 chr3:42306000-42306600 Bivalent Enhancer Small Intestine intestine
46 chr3:42306000-42306600 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
47 chr3:42306000-42306600 Bivalent/Poised TSS HSMM muscle
48 chr3:42306000-42306600 Bivalent/Poised TSS HSMMtube muscle
49 chr3:42306000-42306800 Flanking Bivalent TSS/Enh Colon Smooth Muscle Colon
50 chr3:42306000-42306800 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum

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