Variant report

Variant rs1800629
Chromosome Location chr6:31543031-31543032
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31536000-31546200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr6:31536000-31548400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:31536600-31544200 Weak transcription K562 blood
4 chr6:31539000-31543200 Flanking Active TSS GM12878-XiMat blood
5 chr6:31540200-31548000 Weak transcription Small Intestine intestine
6 chr6:31540800-31543200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
7 chr6:31540800-31543200 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr6:31540800-31543200 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr6:31540800-31543200 Enhancers Fetal Thymus thymus
10 chr6:31540800-31543200 Weak transcription Thymus Thymus
11 chr6:31541000-31543400 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr6:31541200-31543400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr6:31541400-31546200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:31542000-31543200 Enhancers Primary hematopoietic stem cells blood
15 chr6:31542200-31543200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr6:31542400-31543200 Enhancers Primary monocytes fromperipheralblood blood
17 chr6:31542400-31543200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
18 chr6:31542400-31543600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
19 chr6:31542400-31545200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
20 chr6:31542600-31543400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
21 chr6:31542600-31543400 Bivalent Enhancer Fetal Muscle Leg muscle
22 chr6:31542800-31543200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:31542800-31543200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr6:31542800-31543200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:31542800-31543200 Enhancers Liver Liver
26 chr6:31542800-31543200 Flanking Active TSS Rectal Smooth Muscle rectum
27 chr6:31542800-31543200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
28 chr6:31542800-31543400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr6:31542800-31543400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:31542800-31543400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
31 chr6:31542800-31543400 Bivalent Enhancer Placenta Placenta
32 chr6:31542800-31543400 Flanking Active TSS Dnd41 blood
33 chr6:31542800-31543800 Flanking Active TSS Primary T cells fromperipheralblood blood
34 chr6:31542800-31543800 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr6:31542800-31543800 Bivalent Enhancer Fetal Muscle Trunk muscle
36 chr6:31542800-31544000 Active TSS Stomach Smooth Muscle stomach
37 chr6:31542800-31544600 Flanking Active TSS Primary B cells from cord blood blood
38 chr6:31542800-31544600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
39 chr6:31542800-31545200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
40 chr6:31543000-31543200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:31543000-31543200 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr6:31543000-31543200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
43 chr6:31543000-31543200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr6:31543000-31543200 Flanking Active TSS Adipose Nuclei Adipose
45 chr6:31543000-31543200 Bivalent Enhancer Fetal Stomach stomach
46 chr6:31543000-31543200 Flanking Active TSS Placenta Amnion Placenta Amnion
47 chr6:31543000-31543200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
48 chr6:31543000-31543200 Enhancers Rectal Mucosa Donor 31 rectum
49 chr6:31543000-31543200 Enhancers Right Atrium heart
50 chr6:31543000-31543200 Flanking Active TSS Spleen Spleen

Quick Search:


  
Input of quick search could be:

what's new

Quick links