Variant report

Variant	rs1806563
Chromosome Location	chr1:225025917-225025918
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:225018653..225020810-chr1:225024865..225027538,2	K562	blood:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10495228	0.82[ASN][1000 genomes]
rs12097622	0.80[AMR][1000 genomes]
rs12564683	0.81[ASN][1000 genomes]
rs12565019	0.82[ASN][1000 genomes]
rs12565439	0.83[JPT][hapmap]
rs12567461	0.82[ASN][1000 genomes]
rs12567470	0.82[ASN][1000 genomes]
rs1316512	0.84[ASN][1000 genomes]
rs1361923	0.85[ASN][1000 genomes]
rs1600865	0.81[ASN][1000 genomes]
rs16856396	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs16856435	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs16856463	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs16856829	0.92[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs16857787	0.82[ASN][1000 genomes]
rs16858145	0.82[ASN][1000 genomes]
rs16858216	0.82[ASN][1000 genomes]
rs16858299	0.81[ASN][1000 genomes]
rs1892121	0.85[ASN][1000 genomes]
rs1936629	0.81[ASN][1000 genomes]
rs1936632	0.85[ASN][1000 genomes]
rs1961688	0.84[JPT][hapmap]
rs2101143	0.82[ASN][1000 genomes]
rs2252950	0.86[ASN][1000 genomes]
rs2298257	0.81[CHB][hapmap];0.84[JPT][hapmap];0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2406098	0.80[ASN][1000 genomes]
rs2449316	0.80[ASN][1000 genomes]
rs2489310	0.81[ASN][1000 genomes]
rs2501078	0.90[JPT][hapmap]
rs2501081	0.82[ASN][1000 genomes]
rs2662929	0.84[ASN][1000 genomes]
rs2800234	0.98[ASN][1000 genomes]
rs2802552	0.84[JPT][hapmap]
rs3012182	0.83[JPT][hapmap]
rs4379650	0.80[ASN][1000 genomes]
rs4587536	0.92[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs55635719	0.91[ASN][1000 genomes]
rs55752315	0.92[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs55754430	0.82[ASN][1000 genomes]
rs56203783	0.83[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs56237431	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs61466304	0.82[ASN][1000 genomes]
rs61540517	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs729398	0.82[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:225025200-225026400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr1:225025600-225026600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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