Variant report

Variant	rs180886
Chromosome Location	chr15:34621036-34621037
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:34610196..34613869-chr15:34616298..34621917,4	K562	blood:

Variant related genes	Relation type
ENSG00000140199	Chromatin interaction

Extended variants
information (count: 162 )
Associated
traits (count: 15 )

rSNPs within LD-proxies of this variant (count:139)

rs_ID	r²[population]
rs104017	1.00[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs1045204	0.94[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.93[MEX][hapmap]
rs1045238	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1133154	0.94[GIH][hapmap]
rs11631094	0.89[CHB][hapmap];0.92[CHD][hapmap];0.86[JPT][hapmap];0.89[ASN][1000 genomes]
rs12591967	0.93[CEU][hapmap];0.94[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.85[TSI][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12592913	0.90[ASN][1000 genomes]
rs12593384	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12594569	0.82[CHB][hapmap];0.92[CHD][hapmap];0.81[JPT][hapmap]
rs12595504	0.94[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap];0.93[MEX][hapmap];0.92[ASN][1000 genomes]
rs168335	0.84[ASN][1000 genomes]
rs16958878	0.94[GIH][hapmap]
rs16958910	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16958954	0.93[CEU][hapmap];0.94[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.85[TSI][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16958989	0.80[CHB][hapmap];0.83[ASN][1000 genomes]
rs16958995	0.93[CEU][hapmap];0.88[CHB][hapmap];0.95[JPT][hapmap];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16959012	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16959014	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16959020	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16959021	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1845773	0.95[ASN][1000 genomes]
rs186987	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2085966	0.82[CHB][hapmap];0.81[JPT][hapmap]
rs2126421	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2219668	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2615357	0.87[ASN][1000 genomes]
rs2644243	0.89[CHB][hapmap];0.86[ASN][1000 genomes]
rs2644245	0.92[ASN][1000 genomes]
rs2644247	0.82[CHB][hapmap];0.92[CHD][hapmap]
rs2705343	0.81[CHD][hapmap]
rs2705348	0.94[CHB][hapmap];0.90[JPT][hapmap]
rs28539755	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3063	0.94[CHB][hapmap];0.95[JPT][hapmap];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34639726	0.95[ASN][1000 genomes]
rs347805	0.87[ASN][1000 genomes]
rs347806	0.83[ASN][1000 genomes]
rs347807	0.83[ASN][1000 genomes]
rs347817	0.85[ASN][1000 genomes]
rs347818	0.82[CHB][hapmap];0.92[CHD][hapmap]
rs347819	0.81[CHB][hapmap];0.81[JPT][hapmap]
rs347827	1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs347830	1.00[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs347831	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs347832	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs347833	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs347834	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs347835	0.86[ASN][1000 genomes]
rs347836	1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs347837	0.90[ASN][1000 genomes]
rs347838	0.90[ASN][1000 genomes]
rs347842	0.94[CHB][hapmap];0.94[CHD][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs347843	0.89[ASN][1000 genomes]
rs347845	0.82[CHB][hapmap];0.92[CHD][hapmap];0.81[JPT][hapmap];0.80[ASN][1000 genomes]
rs347846	0.82[CHB][hapmap]
rs347847	0.86[ASN][1000 genomes]
rs347848	0.94[CHB][hapmap];0.82[ASN][1000 genomes]
rs347849	0.94[CHB][hapmap];0.94[CHD][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs347851	0.94[CHB][hapmap];0.86[ASN][1000 genomes]
rs347856	0.80[ASN][1000 genomes]
rs347858	0.89[ASN][1000 genomes]
rs347860	0.83[ASN][1000 genomes]
rs347861	0.82[CHB][hapmap];0.92[CHD][hapmap];0.81[JPT][hapmap];0.85[ASN][1000 genomes]
rs347866	0.82[CHB][hapmap];0.80[ASN][1000 genomes]
rs347867	0.81[CHB][hapmap];0.81[JPT][hapmap];0.83[ASN][1000 genomes]
rs380248	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs405080	0.87[ASN][1000 genomes]
rs422388	0.94[CHB][hapmap];0.91[JPT][hapmap];0.90[ASN][1000 genomes]
rs4238572	0.91[GIH][hapmap]
rs426634	0.94[CHB][hapmap];0.92[CHD][hapmap];0.81[JPT][hapmap];0.84[ASN][1000 genomes]
rs436552	0.82[CHB][hapmap];0.89[CHD][hapmap]
rs440025	0.84[ASN][1000 genomes]
rs449053	0.84[ASN][1000 genomes]
rs4569235	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55745608	0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56057955	0.95[ASN][1000 genomes]
rs56207527	0.81[ASN][1000 genomes]
rs56388838	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56762274	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs57715165	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57875866	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58343025	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59375529	0.83[ASN][1000 genomes]
rs59452641	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59802332	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59861881	0.95[ASN][1000 genomes]
rs60114685	0.88[ASN][1000 genomes]
rs60156693	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60539207	0.88[ASN][1000 genomes]
rs61376537	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6495660	0.86[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6495661	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6495662	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];0.90[JPT][hapmap];0.93[MEX][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7163195	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7163919	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7164902	0.82[CHB][hapmap];0.92[CHD][hapmap];0.81[JPT][hapmap]
rs7166043	0.86[ASN][1000 genomes]
rs7166066	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7169857	0.92[ASN][1000 genomes]
rs7170785	0.92[ASN][1000 genomes]
rs7175028	0.93[CEU][hapmap];0.94[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.85[TSI][hapmap];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7176009	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7176426	0.93[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7181260	0.93[CEU][hapmap];0.93[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7182584	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72486679	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73374434	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73374455	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73374473	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73374475	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73374477	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73374490	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73374491	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73374493	0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73374500	0.95[ASN][1000 genomes]
rs73374502	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73376010	0.92[ASN][1000 genomes]
rs73390084	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73392004	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7495538	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs756086	1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs8023583	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8025057	0.93[CEU][hapmap];0.88[CHB][hapmap];0.92[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.85[TSI][hapmap];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8028600	0.85[JPT][hapmap]
rs8031145	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8031147	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8031404	0.94[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.95[JPT][hapmap];0.92[MEX][hapmap];0.92[ASN][1000 genomes]
rs8031958	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8031961	0.90[ASN][1000 genomes]
rs8032347	0.94[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs8033032	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8037379	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8038177	1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs8041425	0.80[ASN][1000 genomes]
rs8042163	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8043005	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs924065	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9630418	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9972305	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9972323	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052804	chr15:34498529-34841447	Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv542341	chr15:34498529-34841447	Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	esv1798578	chr15:34543021-34988247	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	esv1804312	chr15:34543021-34988247	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
5	esv1821622	chr15:34543021-34988247	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
6	esv1850950	chr15:34543021-34988247	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
7	esv2758376	chr15:34543021-34988247	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
8	esv2760024	chr15:34543021-34988247	Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	nsv428303	chr15:34543021-34988247	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
10	nsv1036475	chr15:34552879-34841587	Bivalent/Poised TSS Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
11	nsv542342	chr15:34552879-34841587	Active TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
12	nsv1048550	chr15:34553078-34841447	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
13	nsv542343	chr15:34553078-34841447	Active TSS Genic enhancers Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
14	nsv471682	chr15:34560451-34882630	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
15	nsv469547	chr15:34594557-34757807	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
16	nsv482528	chr15:34594557-34757807	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
17	esv1817014	chr15:34598601-34911177	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
18	esv1817924	chr15:34598601-34911177	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
19	esv1847172	chr15:34598601-34911177	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
20	esv1802396	chr15:34598601-34988247	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
21	esv1809360	chr15:34598601-34988247	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
22	esv1844776	chr15:34598601-34988247	Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
23	nsv427957	chr15:34598601-34988247	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

mRNA abundance (count:15)

SNP	Gene	Cis/trans	Tissue	Source
rs180886	SLC12A6	cis	Thyroid	GTEx
rs180886	NOP10	cis	Skin Sun Exposed Lower leg	GTEx
rs180886	NOLA3	cis	multi-tissue	Pritchard
rs180886	NOP10	cis	Heart Left Ventricle	GTEx
rs180886	NOP10	cis	Esophagus Mucosa	GTEx
rs180886	NOP10	cis	parietal	SCAN
rs180886	NOP10	cis	Artery Tibial	GTEx
rs180886	NOP10	cis	cerebellum	SCAN
rs180886	PGBD4	cis	cerebellum	SCAN
rs180886	NOP10	cis	Esophagus Muscularis	GTEx
rs180886	OTUD7A	cis	cerebellum	SCAN
rs180886	TMEM85	cis	cerebellum	SCAN
rs180886	NOP10	cis	Nerve Tibial	GTEx
rs180886	NOP10	cis	Thyroid	GTEx
rs180886	NOP10	cis	Muscle Skeletal	GTEx

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34611000-34628600	Weak transcription	Lung	lung
2	chr15:34611200-34629200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:34611400-34626000	Weak transcription	HUVEC	blood vessel
4	chr15:34611400-34626400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr15:34611400-34626400	Weak transcription	Brain Angular Gyrus	brain
6	chr15:34614600-34628600	Weak transcription	Psoas Muscle	Psoas
7	chr15:34616200-34628600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr15:34617200-34626400	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr15:34618000-34622800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr15:34618200-34624000	Enhancers	Primary T cells fromperipheralblood	blood
11	chr15:34618400-34626400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr15:34618400-34627800	Weak transcription	Left Ventricle	heart
13	chr15:34619200-34622200	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr15:34619200-34624000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr15:34619600-34621200	Enhancers	Primary neutrophils fromperipheralblood	blood
16	chr15:34619600-34621600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr15:34619600-34621800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
18	chr15:34619600-34622200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
19	chr15:34619800-34621600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
20	chr15:34619800-34625800	Enhancers	Primary hematopoietic stem cells	blood
21	chr15:34619800-34628600	Weak transcription	Pancreas	Pancrea
22	chr15:34620000-34622400	Enhancers	Primary hematopoietic stem cells short term culture	blood
23	chr15:34620400-34621400	Enhancers	Primary B cells from cord blood	blood
24	chr15:34620400-34621600	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr15:34620400-34622200	Flanking Active TSS	GM12878-XiMat	blood
26	chr15:34620400-34623600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr15:34620400-34625600	Enhancers	Primary B cells from peripheral blood	blood
28	chr15:34620600-34621200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
29	chr15:34620600-34621200	Weak transcription	Monocytes-CD14+_RO01746	blood
30	chr15:34620600-34621400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
31	chr15:34620600-34621800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
32	chr15:34620600-34623000	Enhancers	Primary T cells from cord blood	blood
33	chr15:34620600-34626400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr15:34620600-34626400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
35	chr15:34620800-34621200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
36	chr15:34620800-34625000	Enhancers	Primary T helper naive cells from peripheral blood	blood
37	chr15:34620800-34626400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
38	chr15:34620800-34626800	Weak transcription	Brain Anterior Caudate	brain
39	chr15:34621000-34621400	Weak transcription	Aorta	Aorta
40	chr15:34621000-34621400	Weak transcription	Brain Cingulate Gyrus	brain
41	chr15:34621000-34621600	Enhancers	Brain Substantia Nigra	brain
42	chr15:34621000-34624200	Weak transcription	Thymus	Thymus
43	chr15:34621000-34628200	Weak transcription	Fetal Muscle Leg	muscle

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