The 2.0 version of rSNPBase

Variant report

Variant rs1809293
Chromosome Location chr11:46876502-46876503
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46868000-46909000 Weak transcription Small Intestine intestine
2 chr11:46868200-46879600 Weak transcription Left Ventricle heart
3 chr11:46868200-46880000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:46868400-46876600 Weak transcription Fetal Muscle Leg muscle
5 chr11:46868400-46877200 Weak transcription Brain Anterior Caudate brain
6 chr11:46868400-46877400 Weak transcription Fetal Muscle Trunk muscle
7 chr11:46868400-46878600 Weak transcription HSMMtube muscle
8 chr11:46868400-46878800 Weak transcription Right Ventricle heart
9 chr11:46868400-46879200 Weak transcription Fetal Kidney kidney
10 chr11:46868400-46879400 Weak transcription Brain Substantia Nigra brain
11 chr11:46868400-46879600 Weak transcription Fetal Intestine Large intestine
12 chr11:46868400-46879800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr11:46868400-46880200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr11:46868400-46880400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr11:46868400-46884200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:46868600-46876600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr11:46868600-46877000 Weak transcription Duodenum Mucosa Duodenum
18 chr11:46868600-46877200 Weak transcription Brain Hippocampus Middle brain
19 chr11:46868600-46877400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr11:46868600-46877600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr11:46868600-46877800 Weak transcription Fetal Stomach stomach
22 chr11:46868600-46878400 Weak transcription Fetal Lung lung
23 chr11:46868600-46879200 Weak transcription Brain Cingulate Gyrus brain
24 chr11:46868600-46879200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr11:46868600-46879400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:46868600-46879600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr11:46868600-46879800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr11:46868600-46879800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr11:46868600-46879800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr11:46868600-46879800 Weak transcription Stomach Smooth Muscle stomach
31 chr11:46868600-46880000 Weak transcription Brain Angular Gyrus brain
32 chr11:46868600-46880000 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr11:46868600-46880000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr11:46868600-46885400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:46868600-46894400 Weak transcription HMEC breast
36 chr11:46868600-46895200 Weak transcription Fetal Heart heart
37 chr11:46868600-46917400 Weak transcription Fetal Brain Male brain
38 chr11:46868800-46878000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr11:46868800-46879600 Weak transcription Fetal Brain Female brain
40 chr11:46868800-46879800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr11:46868800-46884200 Weak transcription NHEK skin
42 chr11:46868800-46913000 Weak transcription A549 lung
43 chr11:46869000-46879800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr11:46869000-46879800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr11:46869000-46880200 Weak transcription Brain Germinal Matrix brain
46 chr11:46869000-46886800 Weak transcription NHDF-Ad bronchial
47 chr11:46872600-46880400 Weak transcription Esophagus oesophagus
48 chr11:46873000-46877800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr11:46873200-46877800 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr11:46873400-46879800 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015