Variant report

Variant rs1811305
Chromosome Location chr19:53218912-53218913
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53206600-53227200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:53207400-53219400 Strong transcription Dnd41 blood
3 chr19:53208200-53219400 Strong transcription Fetal Muscle Trunk muscle
4 chr19:53209400-53225800 Weak transcription Hela-S3 cervix
5 chr19:53209600-53219200 Weak transcription H9 Cell Line embryonic stem cell
6 chr19:53209600-53219400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:53209600-53223800 Weak transcription NHLF lung
8 chr19:53209600-53224000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr19:53209600-53224000 Weak transcription Right Ventricle heart
10 chr19:53210200-53219000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr19:53210200-53223400 Weak transcription Colonic Mucosa Colon
12 chr19:53210200-53227000 Weak transcription Fetal Heart heart
13 chr19:53210400-53219000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr19:53210400-53225200 Weak transcription HMEC breast
15 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
16 chr19:53210600-53219000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
17 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
18 chr19:53210800-53219000 Strong transcription Ovary ovary
19 chr19:53211000-53219400 Strong transcription Cortex derived primary cultured neurospheres brain
20 chr19:53212200-53227000 Strong transcription Fetal Stomach stomach
21 chr19:53212400-53219800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:53212400-53231000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr19:53212600-53219000 Strong transcription Gastric stomach
24 chr19:53212600-53226800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr19:53213000-53219000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr19:53213000-53219000 Strong transcription HSMMtube muscle
27 chr19:53213000-53219600 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr19:53213200-53219200 Strong transcription Stomach Smooth Muscle stomach
29 chr19:53213600-53219000 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr19:53213600-53219600 Strong transcription Fetal Intestine Large intestine
31 chr19:53214000-53219000 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr19:53214000-53219000 Strong transcription Brain Hippocampus Middle brain
33 chr19:53214600-53219200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr19:53214800-53237200 Weak transcription Stomach Mucosa stomach
35 chr19:53215200-53219200 Strong transcription Brain Inferior Temporal Lobe brain
36 chr19:53215400-53219000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr19:53215600-53219800 Weak transcription NH-A brain
38 chr19:53215600-53225000 Weak transcription Fetal Kidney kidney
39 chr19:53215800-53237000 Weak transcription Brain Angular Gyrus brain
40 chr19:53216000-53230000 Weak transcription HSMM muscle
41 chr19:53216200-53219000 Strong transcription Thymus Thymus
42 chr19:53216200-53219200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:53216200-53219400 Weak transcription K562 blood
44 chr19:53216200-53223800 Weak transcription Pancreas Pancrea
45 chr19:53216200-53224000 Weak transcription Rectal Smooth Muscle rectum
46 chr19:53216400-53219000 Strong transcription Primary neutrophils fromperipheralblood blood
47 chr19:53216400-53219000 Weak transcription Esophagus oesophagus
48 chr19:53216400-53222800 Weak transcription Muscle Satellite Cultured Cells --
49 chr19:53216400-53223800 Weak transcription Fetal Brain Female brain
50 chr19:53216400-53224800 Weak transcription Primary T killer memory cells from peripheral blood blood

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