Variant report

Variant	rs181434758
Chromosome Location	chr3:119420089-119420090
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NR2F2	chr3:119419779-119420113	K562	blood:	n/a	n/a
2	TAL1	chr3:119419807-119420104	K562	blood:	n/a	n/a
3	PML	chr3:119418899-119420243	GM12878	blood:	n/a	n/a

Variant related genes	Relation type
MAATS1	TF binding region

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv460834	chr3:119384163-119458851	Active TSS Strong transcription Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv591390	chr3:119384163-119458851	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv591391	chr3:119403145-119442572	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv3510643	chr3:119419793-119420423	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
5	esv3510640	chr3:119419795-119420503	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
6	esv3463493	chr3:119419804-119420448	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
7	esv3463492	chr3:119419839-119420367	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
8	esv3510642	chr3:119419859-119420395	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
9	esv3510644	chr3:119419860-119420395	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
10	esv3463494	chr3:119419914-119420353	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
11	esv3510645	chr3:119419916-119420348	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:119406000-119421400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:119418400-119421200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr3:119418400-119422200	ZNF genes & repeats	GM12878-XiMat	blood
4	chr3:119418800-119421400	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr3:119419000-119420800	Enhancers	Primary T helper naive cells from peripheral blood	blood
6	chr3:119419000-119421200	Enhancers	Adipose Nuclei	Adipose
7	chr3:119419000-119421200	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr3:119419000-119421400	Enhancers	Primary B cells from peripheral blood	blood
9	chr3:119419000-119421400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr3:119419000-119421400	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr3:119419000-119421400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr3:119419000-119421400	Enhancers	Primary T helper cells fromperipheralblood	blood
13	chr3:119419200-119420200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr3:119419200-119420600	Enhancers	Primary T cells fromperipheralblood	blood
15	chr3:119419200-119420600	Enhancers	HUVEC	blood vessel
16	chr3:119419200-119420800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
17	chr3:119419200-119420800	Enhancers	Left Ventricle	heart
18	chr3:119419200-119420800	Enhancers	Small Intestine	intestine
19	chr3:119419200-119421200	Enhancers	Duodenum Mucosa	Duodenum
20	chr3:119419200-119421400	Enhancers	Primary neutrophils fromperipheralblood	blood
21	chr3:119419200-119421400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr3:119419400-119420400	Weak transcription	Placenta	Placenta
23	chr3:119419400-119421200	Weak transcription	Duodenum Smooth Muscle	Duodenum
24	chr3:119419400-119421400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr3:119419400-119421400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
26	chr3:119419400-119421400	Enhancers	Primary T killer memory cells from peripheral blood	blood
27	chr3:119419400-119421400	Weak transcription	Stomach Mucosa	stomach
28	chr3:119419600-119420400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr3:119419600-119421200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr3:119419600-119421200	Weak transcription	Right Ventricle	heart
31	chr3:119419600-119421200	Weak transcription	A549	lung
32	chr3:119419600-119421400	Enhancers	Liver	Liver
33	chr3:119419800-119421400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr3:119420000-119420200	Enhancers	Rectal Mucosa Donor 31	rectum
35	chr3:119420000-119420200	Enhancers	Dnd41	blood

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