Variant report

Variant	rs1818737
Chromosome Location	chr11:18219402-18219403
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs1915392	0.80[AMR][1000 genomes]
rs2168365	0.83[AMR][1000 genomes]
rs2168366	0.83[AMR][1000 genomes]
rs2263408	0.83[AMR][1000 genomes]
rs2445213	0.80[AMR][1000 genomes]
rs2445215	0.80[AMR][1000 genomes]
rs2445217	0.83[AMR][1000 genomes]
rs2445219	0.83[AMR][1000 genomes]
rs2445220	0.83[AMR][1000 genomes]
rs2445221	0.80[AMR][1000 genomes]
rs2445222	0.83[AMR][1000 genomes]
rs2445223	0.83[AMR][1000 genomes]
rs2460820	0.83[AMR][1000 genomes]
rs2460822	0.80[AMR][1000 genomes]
rs2460823	0.80[AMR][1000 genomes]
rs2460828	0.83[AMR][1000 genomes]
rs2460829	0.83[AMR][1000 genomes]
rs2460830	0.83[AMR][1000 genomes]
rs2468780	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2468794	0.83[AMR][1000 genomes]
rs2468795	0.83[AMR][1000 genomes]
rs2468796	0.83[AMR][1000 genomes]
rs2468797	0.83[AMR][1000 genomes]
rs2468798	0.80[AMR][1000 genomes]
rs2468800	0.80[AMR][1000 genomes]
rs2468801	0.80[AMR][1000 genomes]
rs2468803	0.80[AMR][1000 genomes]
rs2468805	0.83[AMR][1000 genomes]
rs2468806	0.81[AMR][1000 genomes]
rs2468808	0.83[AMR][1000 genomes]
rs2468809	0.83[AMR][1000 genomes]
rs2468810	0.83[AMR][1000 genomes]
rs2468811	0.81[AMR][1000 genomes]
rs2468812	0.80[AMR][1000 genomes]
rs2516309	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949248	chr11:17791822-18692687	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
2	nsv428569	chr11:18194030-18350869	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:18211200-18225800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:18218800-18220000	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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