Variant report

Variant	rs181955116
Chromosome Location	chr2:210485015-210485016
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754281	chr2:210484777-210543711	Enhancers Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210476600-210493600	Weak transcription	Aorta	Aorta
2	chr2:210480000-210493200	Weak transcription	Brain Germinal Matrix	brain
3	chr2:210481000-210486400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr2:210481000-210493400	Weak transcription	Pancreas	Pancrea
5	chr2:210481000-210500400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr2:210481400-210493600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:210481600-210487800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr2:210484400-210485200	Genic enhancers	Cortex derived primary cultured neurospheres	brain
9	chr2:210484400-210486800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr2:210484600-210485200	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr2:210484600-210485200	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr2:210484600-210485200	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr2:210484600-210497200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr2:210484800-210485400	Enhancers	Pancreatic Islets	Pancreatic Islet
15	chr2:210484800-210492800	Weak transcription	Fetal Brain Male	brain
16	chr2:210484800-210496000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr2:210485000-210485200	Weak transcription	Fetal Brain Female	brain
18	chr2:210485000-210489000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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