Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11682881	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11684203	1.00[ASN][1000 genomes]
rs11687884	0.82[EUR][1000 genomes]
rs11691356	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11695853	0.82[EUR][1000 genomes]
rs1346709	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1346710	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1991564	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1992126	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs319742	1.00[ASN][1000 genomes]
rs319744	1.00[ASN][1000 genomes]
rs4600582	1.00[ASN][1000 genomes]
rs4605308	1.00[ASN][1000 genomes]
rs56856797	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59222347	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59242499	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60978506	0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72947274	0.82[EUR][1000 genomes]
rs72949240	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7567005	0.82[EUR][1000 genomes]
rs7567105	0.82[EUR][1000 genomes]
rs796245	1.00[ASN][1000 genomes]
rs809482	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv536136	chr2:211497528-211830019	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1012193	chr2:211684524-212072213	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv584310	chr2:211807729-211870954	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:211819200-211820200	Enhancers	NH-A	brain
2	chr2:211819200-211820400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr2:211819400-211821200	Enhancers	Hela-S3	cervix

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