Variant report
| Variant | rs1829538 |
|---|---|
| Chromosome Location | chr3:46628726-46628727 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:46624000-46628800 | Enhancers | Liver | Liver |
| 2 | chr3:46624400-46628800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
| 3 | chr3:46625400-46628800 | Strong transcription | Right Atrium | heart |
| 4 | chr3:46626200-46630200 | Enhancers | Dnd41 | blood |
| 5 | chr3:46626400-46629200 | Enhancers | Stomach Mucosa | stomach |
| 6 | chr3:46626600-46628800 | Enhancers | Pancreas | Pancrea |
| 7 | chr3:46626800-46628800 | Enhancers | Fetal Intestine Large | intestine |
| 8 | chr3:46626800-46629000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 9 | chr3:46627000-46629200 | Enhancers | Fetal Thymus | thymus |
| 10 | chr3:46627200-46628800 | Enhancers | Duodenum Mucosa | Duodenum |
| 11 | chr3:46627200-46634600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 12 | chr3:46627200-46637000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 13 | chr3:46627600-46628800 | Enhancers | Primary T cells from cord blood | blood |
| 14 | chr3:46627800-46629800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 15 | chr3:46628200-46628800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
| 16 | chr3:46628200-46628800 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 17 | chr3:46628200-46628800 | Enhancers | Small Intestine | intestine |
| 18 | chr3:46628200-46629000 | Enhancers | Thymus | Thymus |
| 19 | chr3:46628200-46629200 | Enhancers | HepG2 | liver |
| 20 | chr3:46628400-46628800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 21 | chr3:46628400-46631000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
