Variant report

Variant	rs183821844
Chromosome Location	chr6:76027484-76027485
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016804	chr6:75775846-76188585	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv538310	chr6:75775846-76188585	Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv1024079	chr6:75848556-76238519	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
4	nsv1027915	chr6:75893542-76510113	Active TSS Enhancers Strong transcription Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
5	nsv538311	chr6:75893542-76510113	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
6	nsv830698	chr6:75968810-76115592	Strong transcription Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
7	nsv1022428	chr6:76023118-76575620	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
8	nsv538312	chr6:76023118-76575620	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
9	nsv981158	chr6:76027339-76030595	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75995400-76027600	Weak transcription	Aorta	Aorta
2	chr6:76010400-76027600	Weak transcription	Rectal Smooth Muscle	rectum
3	chr6:76016200-76044400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr6:76018400-76027600	Weak transcription	Fetal Brain Male	brain
5	chr6:76022200-76028000	Weak transcription	Lung	lung
6	chr6:76024800-76042200	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr6:76024800-76047200	Weak transcription	Fetal Muscle Trunk	muscle
8	chr6:76026000-76027800	Enhancers	Fetal Lung	lung
9	chr6:76026600-76028400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr6:76026800-76027600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr6:76026800-76027800	Enhancers	H1 Cell Line	embryonic stem cell
12	chr6:76026800-76027800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr6:76026800-76027800	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr6:76026800-76027800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:76026800-76028000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr6:76026800-76028000	Enhancers	HUVEC	blood vessel
17	chr6:76026800-76028200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr6:76027000-76027800	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr6:76027000-76027800	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr6:76027000-76027800	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr6:76027000-76027800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr6:76027000-76027800	Enhancers	HSMMtube	muscle
23	chr6:76027000-76028000	Enhancers	NHDF-Ad	bronchial
24	chr6:76027000-76029000	Enhancers	Fetal Heart	heart
25	chr6:76027200-76027600	Enhancers	Colon Smooth Muscle	Colon
26	chr6:76027200-76027600	Enhancers	Fetal Muscle Leg	muscle
27	chr6:76027200-76027600	Enhancers	Fetal Stomach	stomach
28	chr6:76027200-76027600	Flanking Active TSS	NHLF	lung
29	chr6:76027200-76027800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
30	chr6:76027200-76027800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr6:76027200-76027800	Enhancers	iPS-15b Cell Line	embryonic stem cell
32	chr6:76027200-76027800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr6:76027200-76027800	Enhancers	Muscle Satellite Cultured Cells	--
34	chr6:76027200-76028200	Enhancers	Osteobl	bone
35	chr6:76027400-76027600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr6:76027400-76027600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr6:76027400-76027600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr6:76027400-76027600	Enhancers	Duodenum Smooth Muscle	Duodenum
39	chr6:76027400-76027600	Enhancers	Psoas Muscle	Psoas
40	chr6:76027400-76027600	Enhancers	Spleen	Spleen
41	chr6:76027400-76027800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr6:76027400-76027800	Enhancers	H9 Cell Line	embryonic stem cell
43	chr6:76027400-76027800	Enhancers	HUES64 Cell Line	embryonic stem cell
44	chr6:76027400-76027800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr6:76027400-76027800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr6:76027400-76027800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr6:76027400-76027800	Enhancers	Right Ventricle	heart
48	chr6:76027400-76027800	Enhancers	Skeletal Muscle Female	skeletal muscle
49	chr6:76027400-76027800	Enhancers	HSMM	muscle
50	chr6:76027400-76027800	Flanking Active TSS	NH-A	brain

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