Variant report

Variant	rs184500622
Chromosome Location	chr1:172685791-172685792
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:172575736..172579106-chr1:172685787..172690333,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000094975	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2565396	chr1:172685443-172686827	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172678400-172685800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr1:172683400-172689200	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr1:172684000-172688000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:172684000-172688400	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr1:172684000-172689000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr1:172684000-172692400	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr1:172684600-172686200	Enhancers	NHEK	skin
8	chr1:172684800-172685800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr1:172685000-172685800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr1:172685000-172686000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:172685000-172686000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr1:172685000-172686000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr1:172685000-172686000	Enhancers	HMEC	breast
14	chr1:172685000-172686200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr1:172685000-172686800	Enhancers	Fetal Heart	heart
16	chr1:172685000-172690400	Enhancers	Placenta	Placenta
17	chr1:172685400-172685800	Enhancers	Left Ventricle	heart
18	chr1:172685400-172686000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr1:172685400-172686000	Enhancers	Primary T cells from cord blood	blood
20	chr1:172685400-172686200	Enhancers	Fetal Thymus	thymus
21	chr1:172685400-172686800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr1:172685400-172687200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr1:172685400-172687400	Enhancers	Primary T helper cells PMA-I stimulated	--
24	chr1:172685400-172687400	Enhancers	HepG2	liver
25	chr1:172685400-172687600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
26	chr1:172685400-172689200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
27	chr1:172685600-172685800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr1:172685600-172686000	Enhancers	Primary T helper cells fromperipheralblood	blood
29	chr1:172685600-172686000	Enhancers	Primary T killer memory cells from peripheral blood	blood
30	chr1:172685600-172686200	Enhancers	Primary T cells fromperipheralblood	blood
31	chr1:172685600-172686200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
32	chr1:172685600-172686200	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr1:172685600-172686200	Enhancers	Thymus	Thymus
34	chr1:172685600-172686200	Enhancers	Dnd41	blood
35	chr1:172685600-172687000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr1:172685600-172687000	Weak transcription	Placenta Amnion	Placenta Amnion

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