Variant report

Variant	rs184539413
Chromosome Location	chr6:101160248-101160249
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:101159648..101161737-chr6:101167476..101169153,2	K562	blood:
2	chr6:101153025..101154840-chr6:101159613..101162231,2	MCF-7	breast:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949535	chr6:100740293-101469052	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv886445	chr6:101004751-101240763	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv886450	chr6:101018032-101168137	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv886451	chr6:101018032-101172328	Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv886452	chr6:101018032-101192051	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv886453	chr6:101018032-101203051	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv886455	chr6:101049108-101203051	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv886456	chr6:101049108-101277926	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	nsv604270	chr6:101058886-101196080	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
10	nsv463991	chr6:101072307-101196080	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
11	nsv604272	chr6:101072307-101196080	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
12	nsv463992	chr6:101072307-101197953	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
13	nsv604273	chr6:101072307-101197953	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
14	nsv604274	chr6:101078718-101196080	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
15	nsv1020692	chr6:101136992-101426071	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
16	nsv604275	chr6:101158950-101277926	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
17	nsv886457	chr6:101158950-101487473	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:101100800-101164600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr6:101111200-101168200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:101111600-101168000	Weak transcription	NHDF-Ad	bronchial
4	chr6:101111800-101168200	Weak transcription	Osteobl	bone
5	chr6:101112000-101161200	Weak transcription	HMEC	breast
6	chr6:101118600-101168000	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr6:101119200-101165600	Weak transcription	NH-A	brain
8	chr6:101119400-101181200	Weak transcription	Left Ventricle	heart
9	chr6:101128800-101168000	Weak transcription	NHLF	lung
10	chr6:101142400-101189600	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr6:101144600-101165200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
12	chr6:101145000-101168000	Weak transcription	Hela-S3	cervix
13	chr6:101145400-101175600	Weak transcription	Stomach Smooth Muscle	stomach
14	chr6:101145600-101168200	Weak transcription	Brain Substantia Nigra	brain
15	chr6:101145600-101169200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr6:101147600-101168000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
17	chr6:101147800-101161200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr6:101147800-101190000	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr6:101148200-101168000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr6:101148200-101172200	Weak transcription	HSMMtube	muscle
21	chr6:101148200-101175600	Weak transcription	Fetal Muscle Leg	muscle
22	chr6:101148200-101189600	Weak transcription	Placenta	Placenta
23	chr6:101148400-101161000	Weak transcription	Liver	Liver
24	chr6:101148600-101160800	Weak transcription	Gastric	stomach
25	chr6:101148600-101161000	Weak transcription	HSMM	muscle
26	chr6:101148600-101161200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr6:101148600-101161800	Weak transcription	Primary monocytes fromperipheralblood	blood
28	chr6:101148600-101173200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr6:101148600-101177800	Weak transcription	Fetal Lung	lung
30	chr6:101148600-101184400	Weak transcription	Primary hematopoietic stem cells	blood
31	chr6:101149400-101174400	Weak transcription	Esophagus	oesophagus
32	chr6:101149600-101168200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
33	chr6:101149600-101190000	Weak transcription	Duodenum Mucosa	Duodenum
34	chr6:101149800-101175000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr6:101150000-101161400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
36	chr6:101150000-101168000	Weak transcription	K562	blood
37	chr6:101150000-101172400	Weak transcription	Monocytes-CD14+_RO01746	blood
38	chr6:101150000-101174800	Weak transcription	Primary T helper cells PMA-I stimulated	--
39	chr6:101150200-101161000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr6:101150200-101161000	Weak transcription	Primary B cells from peripheral blood	blood
41	chr6:101150200-101161200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr6:101150200-101168000	Weak transcription	Muscle Satellite Cultured Cells	--
43	chr6:101150200-101190000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr6:101150200-101190000	Weak transcription	Ovary	ovary
45	chr6:101150200-101190600	Weak transcription	Rectal Mucosa Donor 31	rectum
46	chr6:101150400-101161000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr6:101150400-101161000	Weak transcription	Primary T cells from cord blood	blood
48	chr6:101150400-101161000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr6:101150400-101175600	Weak transcription	NHEK	skin
50	chr6:101150600-101161000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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