Variant report

Variant	rs184830239
Chromosome Location	chr4:80506936-80506937
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999174	chr4:80212935-80512356	Enhancers Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv879506	chr4:80316417-80604625	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv879507	chr4:80365765-80552199	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv879508	chr4:80398708-80552199	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv1002031	chr4:80459528-80759113	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv966289	chr4:80506013-80509660	Enhancers Weak transcription Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:80505600-80507000	Enhancers	Colon Smooth Muscle	Colon
2	chr4:80505600-80507000	Enhancers	Duodenum Smooth Muscle	Duodenum
3	chr4:80505600-80507400	Enhancers	Aorta	Aorta
4	chr4:80506000-80507000	Enhancers	Rectal Smooth Muscle	rectum
5	chr4:80506200-80507000	Enhancers	Placenta	Placenta
6	chr4:80506200-80507200	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr4:80506400-80507000	Enhancers	Fetal Heart	heart
8	chr4:80506400-80507200	Flanking Active TSS	Stomach Smooth Muscle	stomach
9	chr4:80506600-80507000	Enhancers	Left Ventricle	heart
10	chr4:80506600-80507200	Enhancers	Right Atrium	heart
11	chr4:80506600-80507200	Enhancers	Skeletal Muscle Male	skeletal muscle
12	chr4:80506800-80507200	Enhancers	H9 Cell Line	embryonic stem cell
13	chr4:80506800-80507400	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr4:80506800-80507400	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr4:80506800-80507600	Enhancers	HUES6 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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