Variant report

Variant	rs1867215
Chromosome Location	chr4:143612486-143612487
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs13133181	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830101	chr4:143518810-143684392	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143585600-143613000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:143607800-143613600	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr4:143609200-143615800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
4	chr4:143609800-143613800	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr4:143610200-143617000	Weak transcription	Thymus	Thymus
6	chr4:143611000-143617000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr4:143611000-143617400	Enhancers	Primary hematopoietic stem cells	blood
8	chr4:143611600-143617000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr4:143611800-143613000	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr4:143611800-143613000	Enhancers	Left Ventricle	heart
11	chr4:143611800-143617000	Enhancers	Dnd41	blood
12	chr4:143612000-143613000	Enhancers	Psoas Muscle	Psoas
13	chr4:143612200-143612600	Enhancers	Fetal Thymus	thymus
14	chr4:143612400-143613200	Enhancers	Fetal Heart	heart
15	chr4:143612400-143617200	Weak transcription	Skeletal Muscle Female	skeletal muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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