Variant report

Variant	rs188321106
Chromosome Location	chr13:110515889-110515890
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832719	chr13:110512259-110655883	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv32627	chr13:110515211-110524579	Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110514000-110516000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr13:110514200-110516000	Enhancers	HMEC	breast
3	chr13:110514400-110516000	Enhancers	Placenta Amnion	Placenta Amnion
4	chr13:110514400-110516000	Enhancers	NHEK	skin
5	chr13:110514400-110516200	Enhancers	Placenta	Placenta
6	chr13:110515600-110516000	Bivalent Enhancer	Esophagus	oesophagus
7	chr13:110515600-110519000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr13:110515600-110521000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr13:110515600-110521200	Weak transcription	HSMM	muscle
10	chr13:110515800-110520200	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr13:110515800-110520200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr13:110515800-110520800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr13:110515800-110521000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr13:110515800-110521200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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