Variant report

Variant rs1885308
Chromosome Location chr20:4800521-4800522
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:4779200-4802800 Weak transcription Aorta Aorta
2 chr20:4782000-4801600 Weak transcription Fetal Intestine Small intestine
3 chr20:4789000-4801200 Weak transcription Ovary ovary
4 chr20:4790400-4801400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr20:4794800-4801600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr20:4794800-4803000 Weak transcription Small Intestine intestine
7 chr20:4795200-4801400 Weak transcription Fetal Lung lung
8 chr20:4795200-4801600 Weak transcription Stomach Mucosa stomach
9 chr20:4795400-4802400 Weak transcription Dnd41 blood
10 chr20:4795400-4802600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr20:4795400-4802600 Weak transcription Right Atrium heart
12 chr20:4795600-4801400 Weak transcription Fetal Brain Female brain
13 chr20:4795600-4801600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr20:4795600-4802000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr20:4795800-4802000 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr20:4796000-4802200 Genic enhancers Primary monocytes fromperipheralblood blood
17 chr20:4796000-4802200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr20:4796200-4801400 Weak transcription Rectal Smooth Muscle rectum
19 chr20:4796200-4801600 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr20:4796200-4801600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr20:4796400-4800600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr20:4796400-4801200 Weak transcription HUVEC blood vessel
23 chr20:4796400-4801600 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr20:4796400-4802400 Genic enhancers Primary B cells from peripheral blood blood
25 chr20:4796400-4803000 Weak transcription Pancreas Pancrea
26 chr20:4796600-4800600 Weak transcription Brain Anterior Caudate brain
27 chr20:4796600-4800800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr20:4796600-4801400 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr20:4796600-4801400 Weak transcription Adipose Nuclei Adipose
30 chr20:4796600-4801400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr20:4796600-4801400 Weak transcription Stomach Smooth Muscle stomach
32 chr20:4796600-4801600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr20:4796600-4801800 Weak transcription H1 Cell Line embryonic stem cell
34 chr20:4796600-4802000 Weak transcription Colonic Mucosa Colon
35 chr20:4796600-4803000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr20:4796800-4801400 Genic enhancers Primary B cells from cord blood blood
37 chr20:4796800-4801400 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr20:4796800-4801600 Weak transcription Duodenum Mucosa Duodenum
39 chr20:4797200-4801600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr20:4797400-4801600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr20:4797600-4801600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr20:4798200-4801400 Strong transcription Primary hematopoietic stem cells blood
43 chr20:4798200-4801800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr20:4798200-4801800 Genic enhancers Primary T cells from cord blood blood
45 chr20:4798200-4802200 Genic enhancers Primary T helper cells PMA-I stimulated --
46 chr20:4798200-4802200 Genic enhancers Primary T helper cells fromperipheralblood blood
47 chr20:4798400-4800600 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr20:4798400-4801400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr20:4798400-4801400 Weak transcription NHDF-Ad bronchial
50 chr20:4798600-4801200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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