The 2.0 version of rSNPBase

Variant report

Variant rs189097646
Chromosome Location chr22:22196520-22196521
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22182600-22210400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr22:22185400-22200400 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr22:22187200-22198200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr22:22187200-22198400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr22:22187200-22200200 Weak transcription Spleen Spleen
6 chr22:22187800-22211000 Weak transcription Dnd41 blood
7 chr22:22189600-22197400 Weak transcription Esophagus oesophagus
8 chr22:22189600-22198600 Weak transcription Thymus Thymus
9 chr22:22189600-22200600 Weak transcription Ovary ovary
10 chr22:22190000-22197600 Weak transcription Lung lung
11 chr22:22190000-22201200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr22:22190200-22197200 Weak transcription Primary T cells from cord blood blood
13 chr22:22190400-22200600 Weak transcription Brain Germinal Matrix brain
14 chr22:22191000-22197400 Weak transcription Primary B cells from cord blood blood
15 chr22:22192000-22197200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr22:22192000-22197600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr22:22192000-22198000 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr22:22192200-22197200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr22:22192200-22197200 Weak transcription Aorta Aorta
20 chr22:22192200-22197200 Weak transcription Fetal Thymus thymus
21 chr22:22192200-22197400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr22:22192200-22197400 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr22:22192200-22197600 Weak transcription Stomach Smooth Muscle stomach
24 chr22:22192200-22197800 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr22:22192200-22198000 Weak transcription Primary hematopoietic stem cells blood
26 chr22:22192200-22198000 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr22:22192200-22198200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr22:22192200-22198200 Weak transcription Fetal Intestine Large intestine
29 chr22:22192200-22198200 Weak transcription Fetal Intestine Small intestine
30 chr22:22192200-22198400 Weak transcription Right Ventricle heart
31 chr22:22192200-22198600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr22:22192200-22198600 Weak transcription Duodenum Mucosa Duodenum
33 chr22:22192200-22198800 Weak transcription Brain Substantia Nigra brain
34 chr22:22192200-22200200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr22:22192200-22200400 Weak transcription Fetal Brain Female brain
36 chr22:22192200-22200600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr22:22192200-22200800 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr22:22192200-22201200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr22:22192200-22202600 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr22:22192200-22203800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr22:22192200-22203800 Weak transcription NHLF lung
42 chr22:22192200-22204000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr22:22192200-22204200 Weak transcription Small Intestine intestine
44 chr22:22192200-22209000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr22:22192200-22210000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr22:22192200-22210000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr22:22192200-22214600 Weak transcription Hela-S3 cervix
48 chr22:22192200-22220200 Weak transcription Placenta Placenta
49 chr22:22192400-22197400 Weak transcription Fetal Kidney kidney
50 chr22:22192400-22198600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015