Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10487470	1.00[JPT][hapmap]
rs17644601	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17862257	1.00[JPT][hapmap]
rs17862293	0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs17862309	1.00[CHB][hapmap]
rs17863210	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17863212	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17863237	1.00[CHB][hapmap]
rs17864127	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17864156	1.00[CHB][hapmap]
rs17866036	0.87[CEU][hapmap];1.00[CHB][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17867759	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17867764	0.82[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs17867775	1.00[CHB][hapmap]
rs17869212	0.82[CHB][hapmap]
rs17869630	1.00[JPT][hapmap]
rs2023641	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2237793	0.82[CHB][hapmap]
rs28949576	1.00[JPT][hapmap]
rs28951079	1.00[JPT][hapmap]
rs28951991	1.00[JPT][hapmap]
rs28952009	1.00[JPT][hapmap]
rs6467111	0.87[CEU][hapmap];1.00[CHB][hapmap]
rs7794734	0.87[CEU][hapmap];1.00[CHB][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831121	chr7:126593363-126774413	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv889189	chr7:126699088-126963028	Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv2761367	chr7:126717157-126865324	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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