Variant report

Variant	rs189510335
Chromosome Location	chr7:112434573-112434574
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr7:112433919-112434914	MCF10A-Er-Src	breast:	n/a	chr7:112434697-112434708
2	CBX3	chr7:112434186-112434880	K562	blood:	n/a	n/a
3	STAT3	chr7:112433960-112434914	MCF10A-Er-Src	breast:	n/a	chr7:112434697-112434708
4	ZC3H11A	chr7:112434515-112434758	K562	blood:	n/a	n/a
5	STAT5A	chr7:112434435-112434877	K562	blood:	n/a	n/a
6	RCOR1	chr7:112434489-112434760	K562	blood:	n/a	n/a
7	ARID3A	chr7:112434541-112434790	K562	blood:	n/a	n/a
8	FOS	chr7:112434547-112434806	MCF10A-Er-Src	breast:	n/a	n/a
9	STAT3	chr7:112433945-112434873	MCF10A-Er-Src	breast:	n/a	chr7:112434697-112434708
10	YY1	chr7:112434445-112434768	K562	blood:	n/a	n/a
11	STAT3	chr7:112433911-112435111	MCF10A-Er-Src	breast:	n/a	chr7:112434697-112434708
12	ATF1	chr7:112434525-112434784	K562	blood:	n/a	n/a
13	JUN	chr7:112434495-112434862	K562	blood:	n/a	n/a
14	EP300	chr7:112433966-112434781	K562	blood:	n/a	n/a
15	MAZ	chr7:112434560-112434798	K562	blood:	n/a	n/a
16	SPI1	chr7:112434494-112434751	K562	blood:	n/a	n/a
17	ELF1	chr7:112434434-112434841	K562	blood:	n/a	n/a
18	JUND	chr7:112434513-112434866	K562	blood:	n/a	n/a
19	TEAD4	chr7:112434397-112434857	K562	blood:	n/a	n/a
20	FOS	chr7:112434526-112434844	MCF10A-Er-Src	breast:	n/a	n/a
21	MYC	chr7:112434525-112434822	K562	blood:	n/a	n/a
22	STAT3	chr7:112434552-112434804	MCF10A-Er-Src	breast:	n/a	chr7:112434697-112434708
23	CUX1	chr7:112434531-112434692	K562	blood:	n/a	n/a
24	MAFK	chr7:112434434-112434696	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:112429019..112430745-chr7:112433310..112435464,2	MCF-7	breast:

Variant related genes	Relation type
TMEM168	TF binding region
ENSG00000146802	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531436	chr7:111856171-112585407	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
2	esv2752144	chr7:112398372-112499924	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	esv1794529	chr7:112400060-112588376	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
4	nsv967494	chr7:112430613-112445931	Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
5	nsv1031405	chr7:112431403-112476756	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	diseases
6	nsv429801	chr7:112434049-112477049	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
7	esv2752145	chr7:112434049-112500049	ZNF genes & repeats Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
8	nsv1023222	chr7:112434413-112476756	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
9	nsv1034863	chr7:112434413-112504160	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112430800-112440400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:112432400-112434800	Enhancers	K562	blood

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