| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1003621 |
chr3:53448934-54425322 |
Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
31 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1006990 |
chr3:53849510-54285212 |
Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1014595 |
chr3:53944473-54846754 |
Enhancers Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1014157 |
chr3:54168755-54332321 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1001802 |
chr3:54236994-54275831 |
Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv817328 |
chr3:54250314-54380438 |
Enhancers Genic enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv876806 |
chr3:54256648-54330010 |
Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv460555 |
chr3:54270646-54293345 |
Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv460556 |
chr3:54270646-54293345 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv590359 |
chr3:54270646-54293345 |
Active TSS Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv470594 |
chr3:54270646-54296591 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
